Last data update: 2014.03.03

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HMMcopy example dataset (Package: HMMcopy) : HMMcopy example dataset

A set of data of chromosome 6 of matched tumour normal pair. The dataset that is described here belongs to a female triple-negative breast cancer patient from the dataset published in Shah2012,Ha2012. This genome library was sequenced on the ABI/Life SOLiD platform, generating hybrid lengths of 25bp and 50bp paired-end reads. The reads were aligned using BioScope https://products.appliedbiosystems.com/ where reads mapped to multiple sites were ignored.
● Data Source: BioConductor
● Keywords: datasets
● Alias: HMMcopy-dataset, normal_copy, tumour, tumour_copy, tumour_param, tumour_reads, tumour_segments
● 0 images