RPPA
(Package: RTCGA.RPPA) :
RPPA datasets from TCGA project
Package provides RPPA datasets from The Cancer Genome Atlas Project for all available cohorts types from http://gdac.broadinstitute.org/. Data were downloaded using RTCGA-package and contain snapshots for the date: 2015-11-01. The process is described here: http://rtcga.github.io/RTCGA/. Use cases, examples and information about datasets in RTCGA.data family can be found here: browseVignettes("RTCGA"). RPPA data format is explained here https://wiki.nci.nih.gov/display/TCGA/Protein+Array+Data+Format+Specification?src=search. Converting RTCGA.RPPA to Bioconductor datasets' format is explained here convertTCGA.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: ACC.RPPA, ACC.RPPA,BLCA.RPPA,BRCA.RPPA,CESC.RPPA,CHOL.RPPA,COAD.RPPA,COADREAD.RPPA,DLBC.RPPA,ESCA.RPPA,GBM.RPPA,GBMLGG.RPPA,HNSC.RPPA,KICH.RPPA,KIPAN.RPPA,KIRC.RPPA,KIRP.RPPA,LGG.RPPA,LIHC.RPPA,LUAD.RPPA,LUSC.RPPA,MESO.RPPA,OV.RPPA,PAAD.RPPA,PCPG.RPPA,PRAD.RPPA,READ.RPPA,SARC.RPPA,SKCM.RPPA,STAD.RPPA,STES.RPPA,TGCT.RPPA,THCA.RPPA,THYM.RPPA,UCEC.RPPA,UCS.RPPA,UVM.RPPA, BLCA.RPPA, BRCA.RPPA, CESC.RPPA, CHOL.RPPA, COAD.RPPA, COADREAD.RPPA, DLBC.RPPA, ESCA.RPPA, GBM.RPPA, GBMLGG.RPPA, HNSC.RPPA, KICH.RPPA, KIPAN.RPPA, KIRC.RPPA, KIRP.RPPA, LGG.RPPA, LIHC.RPPA, LUAD.RPPA, LUSC.RPPA, MESO.RPPA, OV.RPPA, PAAD.RPPA, PCPG.RPPA, PRAD.RPPA, READ.RPPA, RPPA, SARC.RPPA, SKCM.RPPA, STAD.RPPA, STES.RPPA, TGCT.RPPA, THCA.RPPA, THYM.RPPA, UCEC.RPPA, UCS.RPPA, UVM.RPPA
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