Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
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Results 1 - 3 of 3 found.
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codonDataCtrl (Package: RiboProfiling) : Codon frequency and coverage in ORFs on chromosome 1, for dataset ctrlGAlignments

A list of 2 data.frame objects: one with the number of times each codon type is found in each ORF and one with the number of reads for each codon type in each ORF.
● Data Source: BioConductor
● Keywords: datasets
● Alias: codonDataCtrl
● 0 images

codonIndexCovCtrl (Package: RiboProfiling) : The read coverage for each codon in ORFs on chromosome 1, for dataset ctrlGAlignments

A list containing the number of reads for each codon in each ORF. Codons are reported on their index in the ORF and no information is available about their type/sequence.
● Data Source: BioConductor
● Keywords: datasets
● Alias: codonIndexCovCtrl
● 0 images

ctrlGAlignments (Package: RiboProfiling) : Ribosome profiling data on chr1 in human primary BJ fibroblasts control data: PMID: 23594524.

A dataset containing the alignment information on chromosome 1 from the control BAM. The data object is a GAlignments object containing 3,504,859 hg19 mapped reads.
● Data Source: BioConductor
● Keywords: datasets
● Alias: ctrlGAlignments
● 0 images