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Last data update: 2014.03.03

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Results 1 - 10 of 23 found.
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illuminaHumanv2CHRLENGTHS (Package: illuminaHumanv2.db) : A named vector for the length of each of the chromosomes

illuminaHumanv2CHRLENGTHS provides the length measured in base pairs for each of the chromosomes.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2CHRLENGTHS
● 0 images

illuminaHumanv2CHRLOC (Package: illuminaHumanv2.db) : Map Manufacturer IDs to Chromosomal Location

illuminaHumanv2CHRLOC is an R object that maps manufacturer identifiers to the starting position of the gene. The position of a gene is measured as the number of base pairs.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2CHRLOC, illuminaHumanv2CHRLOCEND
● 0 images

illuminaHumanv2ENSEMBL (Package: illuminaHumanv2.db) : Map Ensembl gene accession numbers with Entrez Gene identifiers

illuminaHumanv2ENSEMBL is an R object that contains mappings between manufacturer identifiers and Ensembl gene accession numbers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2ENSEMBL, illuminaHumanv2ENSEMBL2PROBE
● 0 images

illuminaHumanv2ENTREZID (Package: illuminaHumanv2.db) : Map between Manufacturer Identifiers and Entrez Gene

illuminaHumanv2ENTREZID is an R object that provides mappings between manufacturer identifiers and Entrez Gene identifiers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2ENTREZID, illuminaHumanv2LOCUSID
● 0 images

illuminaHumanv2ENZYME (Package: illuminaHumanv2.db) : Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers

illuminaHumanv2ENZYME is an R object that provides mappings between manufacturer identifiers and EC numbers. illuminaHumanv2ENZYME2PROBE is an R object that maps Enzyme Commission (EC) numbers to manufacturer identifiers.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2ENZYME, illuminaHumanv2ENZYME2PROBE
● 0 images

illuminaHumanv2GENENAME (Package: illuminaHumanv2.db) : Map between Manufacturer IDs and Genes

illuminaHumanv2GENENAME is an R object that maps manufacturer identifiers to the corresponding gene name.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2GENENAME
● 0 images

illuminaHumanv2GO (Package: illuminaHumanv2.db) : Maps between manufacturer IDs and Gene Ontology (GO) IDs

illuminaHumanv2GO is an R object that provides mappings between manufacturer identifiers and the GO identifiers that they are directly associated with. This mapping and its reverse mapping (illuminaHumanv2GO2PROBE) do NOT associate the child terms from the GO ontology with the gene. Only the directly evidenced terms are represented here.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2GO, illuminaHumanv2GO2ALLPROBES, illuminaHumanv2GO2PROBE
● 0 images

illuminaHumanv2MAP (Package: illuminaHumanv2.db) : Map between Manufacturer Identifiers and cytogenetic maps/bands

illuminaHumanv2MAP is an R object that provides mappings between manufacturer identifiers and cytoband locations.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2MAP
● 0 images

illuminaHumanv2MAPCOUNTS (Package: illuminaHumanv2.db) : Number of mapped keys for the maps in package illuminaHumanv2.db

illuminaHumanv2MAPCOUNTS provides the "map count" (i.e. the count of mapped keys) for each map in package illuminaHumanv2.db.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2MAPCOUNTS
● 0 images

illuminaHumanv2listNewMappings (Package: illuminaHumanv2.db) : Custom mappings added to the package

We have used an extensive re-annotation of the illuminaHumanv2 probe sequences to provide additional information that is not captured in the standard Bioconductor packages. Whereas Bioconductor annotations are based on the RefSeq ID that each probe maps to, our additional mappings provide data specific to each probe on the platform. See below for details. We recommend using the probe quality as a form of filtering, and retaining only perfect or good probes for an analysis.

● Data Source: BioConductor
● Keywords: datasets
● Alias: illuminaHumanv2ARRAYADDRESS, illuminaHumanv2CODINGZONE, illuminaHumanv2ENSEMBLREANNOTATED, illuminaHumanv2ENTREZREANNOTATED, illuminaHumanv2GENOMICLOCATION, illuminaHumanv2GENOMICMATCHSIMILARITY, illuminaHumanv2NUID, illuminaHumanv2OTHERGENOMICMATCHES, illuminaHumanv2OVERLAPPINGSNP, illuminaHumanv2PROBEQUALITY, illuminaHumanv2PROBESEQUENCE, illuminaHumanv2REPEATMASK, illuminaHumanv2REPORTERGROUPID, illuminaHumanv2REPORTERGROUPNAME, illuminaHumanv2SECONDMATCHES, illuminaHumanv2SECONDMATCHSIMILARITY, illuminaHumanv2SYMBOLREANNOTATED, illuminaHumanv2TRANSCRIPTOMICMATCHSIMILARITY, illuminaHumanv2fullReannotation, illuminaHumanv2listNewMappings
● 0 images