This data set contains RNA-Seq exon read counts for 3 chromosomes. The data are from an experiment studying the effect of a long non-coding RNA related to the ASCL2 gene in WNT signaling and intestinal cancer. It has two conditions (CON, DOX) and four samples (CON_BR1, CON_BR2, DOX_BR1, DOX_BR2). It also contains a predefined sample.list and libsize.list named sample.list.hg18 and libsize.list.hg18.
This data set contains RNA-Seq gene read counts for 3 chromosomes. The data were downloaded from the ENCODE public repository and are derived from the study of Mortazavi et al., 2008 (Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods. 2008 Jul;5(7):621-8). In their experiment, the authors studied among others genes expression at two developmental stages of mouse liver cells. It has two conditions-developmental stages (e14.5, adult_8_weeks) and four samples (e14.5_1, e14.5_2, a8w_1, a8w_2). It also contains a predefined sample.list and libsize.list named sample.list.mm9 and libsize.list.mm9.
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