srbct
(Package: mixOmics) :
Small version of the small round blue cell tumors of childhood data
This data set from Khan et al., (2001) gives the expression measure of 2308 genes measured on 63 samples.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: srbct
●
0 images
|
stemcells
(Package: mixOmics) :
Human Stem Cells Data
This data set contains the expression of a random subset of 400 genes in 167 samples from 4 independent studies and 3 cell types.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: stemcells
●
0 images
|
diverse.16S
(Package: mixOmics) :
16S microbiome data: most diverse bodysites from HMP
The 16S data from the Human Microbiome Project includes only the most diverse bodysites: Antecubital fossa (skin), Stool and Subgingival plaque (oral) and can be analysed using a multilevel approach to account for repeated measurements using our module mixMC. The data include 162 samples (54 unique healthy individuals) measured on 1,674 OTUs.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: diverse.16S
●
0 images
|
|
This data set contains the expression of 1,000 genes in 47 surgical specimens of human breast tumours from 17 different individuals before and after chemotherapy treatment.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: breast.tumors
●
0 images
|
breast.TCGA
(Package: mixOmics) :
Breast Cancer multi omics data from TCGA
This data set is a small subset of the full data set from The Cancer Genome Atlas that can be analysed with the DIABLO framework. It contains the expression or abundance of three matching omics data sets: mRNA, miRNA and proteomics for 150 breast cancer samples (Basal, Her2, Luminal A) in the training set, and 70 samples in the test set. The test set is missing the proteomics data set.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: breast.TCGA
●
0 images
|
multidrug
(Package: mixOmics) :
Multidrug Resistence Data
This data set contains the expression of 48 known human ABC transporters with patterns of drug activity in 60 diverse cancer cell lines (the NCI-60) used by the National Cancer Institute to screen for anticancer activity.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: multidrug
●
0 images
|
vac18
(Package: mixOmics) :
Vaccine study Data
The data come from a trial evaluating a vaccine based on HIV-1 lipopeptides in HIV-negative volunteers. The vaccine (HIV-1 LIPO-5 ANRS vaccine) contains five HIV-1 amino acid sequences coding for Gag, Pol and Nef proteins. This data set contains the expression measure of a subset of 1000 genes from purified in vitro stimulated Peripheral Blood Mononuclear Cells from 42 repeated samples (12 unique vacicnated participants) 14 weeks after vaccination, , 6 hours after in vitro stimulation by either (1) all the peptides included in the vaccine (LIPO-5), or (2) the Gag peptides included in the vaccine (GAG+) or (3) the Gag peptides not included in the vaccine (GAG-) or (4) without any stimulation (NS).
● Data Source:
CranContrib
● Keywords: datasets
● Alias: vac18
●
0 images
|
yeast
(Package: mixOmics) :
Yeast metabolomic study
Two Saccharomyces Cerevisiae strains were compared under two different environmental conditions, 37 metabolites expression are measured.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: yeast
●
0 images
|
The nutrimouse dataset contains the expression measure of 120 genes potentially involved in nutritional problems and the concentrations of 21 hepatic fatty acids for forty mice.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: nutrimouse
●
0 images
|
|
Three physiological and three exercise variables are measured on twenty middle-aged men in a fitness club.
● Data Source:
CranContrib
● Keywords: datasets
● Alias: linnerud
●
0 images
|
providing 
.