org.At.tairENZYME2TAIR is an R object that maps Enzyme Commission (EC) numbers to TAIR identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairENZYME2TAIR
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org.At.tairGENENAME is an R object that maps TAIR identifiers to the corresponding gene name.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairGENENAME
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org.At.tairGO
(Package: org.At.tair.db) :
Map between TAIR IDs and Gene Ontology (GO)
org.At.tairGO is an R object that provides mappings between TAIR identifiers and the GO identifiers that they are directly associated with. This mapping and its reverse mapping do NOT associate the child terms from the GO ontology with the gene. Only the directly evidenced terms are represented here.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairGO, org.At.tairGO2TAIR
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org.At.tairGO2ALLTAIRS is an R object that provides mappings between a given GO identifier and all TAIR identifiers annotated at that GO term or one of its children in the GO ontology.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairGO2ALLTAIRS
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org.At.tairMAPCOUNTS
(Package: org.At.tair.db) :
Number of mapped keys for the maps in package org.At.tair.db
org.At.tairMAPCOUNTS provides the "map count" (i.e. the count of mapped keys) for each map in package org.At.tair.db.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairMAPCOUNTS
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org.At.tairORGANISM is an R object that contains a single item: a character string that names the organism for which org.At.tair was built.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairORGANISM
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org.At.tairPATH
(Package: org.At.tair.db) :
Mappings between TAIR identifiers and KEGG pathway identifiers
KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data for various organisms. org.At.tairPATH maps TAIR identifiers to the identifiers used by KEGG for pathways in which the genes represented by the TAIR identifiers are involved
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairPATH
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org.At.tairPATH2TAIR
(Package: org.At.tair.db) :
Map between Kyoto Encyclopedia of Genes and Genomes (KEGG)
org.At.tairPATH2TAIR is an R object that provides mappings between KEGG identifiers and TAIR identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairPATH2TAIR
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org.At.tairPMID
(Package: org.At.tair.db) :
Map between TAIR Identifiers and PubMed Identifiers
org.At.tairPMID is an R object that provides mappings between TAIR identifiers and PubMed identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairPMID
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org.At.tairPMID2TAIR is an R object that provides mappings between PubMed identifiers and TAIR identifiers.
● Data Source:
BioConductor
● Keywords: datasets
● Alias: org.At.tairPMID2TAIR
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