Last data update: 2014.03.03

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IlluminaBodymap (Package: rgsepd) :

A collection of counts datasets from Illumina Human Bodymap 2.0, one sample each for adipose, blood, heart and skeletal_muscle. Four technical replicates are created by downsampling the original Illumina data. Alignment was performed by Ensembl, so the source of this dataset is ftp://ftp.ensembl.org/pub/release-70/bam/homo_sapiens/genebuild . Each of the four Human Bodymap samples are downsampled four times. Read counts are collected with Bedtools CoverageBed and a RefSeq exon annotation.
● Data Source: BioConductor
● Keywords: datasets
● Alias: IlluminaBodymap
● 0 images

IlluminaBodymapMeta (Package: rgsepd) :

The metadata table required to inform GSEPD of the sample/condition and abbreviated names for each column of the included 'counts' dataset. You should mirror this table's structure for your dataset.
● Data Source: BioConductor
● Keywords: datasets
● Alias: IlluminaBodymapMeta
● 0 images