This class is a simple temporary container that extends the AnnotationHubMetadata. Please read that documentation for details. This class is likely to evolve in the future. See PAHD for to construct these objects from dcf files.
● Data Source:
BioConductor
● Keywords:
● Alias: .PAHD, PAHD-class
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Reads ProteomicsAnnotationHubData dcf files and prepares them for inclusion into AnnotationHub. See ProteomicsAnnotationDataHub{} for details and an example.
● Data Source:
BioConductor
● Keywords:
● Alias: PAHD
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This function compares the metadata of a remote object rem available on AnnotationHub and a local PAHD object. If these are identical, TRUE is returned, FALSE otherwise.
● Data Source:
BioConductor
● Keywords:
● Alias: identicalRemLoc
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Takes a list of PAHD instances and returns a subset matching the requested resource.
● Data Source:
BioConductor
● Keywords:
● Alias: makeAnnotationHubMetadata
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Reads one or multiple ProteomicsAnnotationHubData dcf files into a matrix that can be processed with PAHD. Commnent lines starting with # will be removed. See ProteomicsAnnotationDataHub() for details.
● Data Source:
BioConductor
● Keywords:
● Alias: readPahdFiles
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Writes a simple template in dcf format (like an R package DESCRIPTION file) that, once completed (see ProteomicsAnnotationHub() for details), can be imported with readPahdFiles or directly processed with PAHD. Note that these cdf files support comments (as opposed to DESCRIPTION files). Lines starting with # will be removed when parsed by readPahdFiles.
● Data Source:
BioConductor
● Keywords:
● Alias: writePahdTemplate
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providing 
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