R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 4 of 4 found.
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FWSEplot (Package: ReQON) : Plot reported vs. empirical quality.

Plots reported vs. empirical quality scores. Also calculates and outputs Frequency-Weighted Squared Error (FWSE) and reports FWSE on the plot. The points are shaded according to the relative frequency of bases assigned that quality score.

● Data Source: BioConductor
● Keywords:
● Alias: FWSEplot
● 1 images

QualFreqPlot (Package: ReQON) : Plot frequency distributions of quality scores.

Plots the relative frequency distribution of quality scores before and after recalibration.

● Data Source: BioConductor
● Keywords:
● Alias: QualFreqPlot
● 1 images

ReQON (Package: ReQON) : Recalibrating Quality Of Nucleotides

Recalibrate the nucleotide quality scores of either single-end or paired-end next-generation sequencing data that has been aligned.

● Data Source: BioConductor
● Keywords:
● Alias: ReQON
● 0 images

ReadPosErrorPlot (Package: ReQON) : Plot distribution of errors by read position.

Plots the number of sequencing errors by read position.

● Data Source: BioConductor
● Keywords:
● Alias: ReadPosErrorPlot
● 1 images