R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
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Results 1 - 10 of 11 found.
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RProtVis (Package: RforProteomics) : Opens the visualisation vignette

Opens the visualisation vignette

● Data Source: BioConductor
● Keywords:
● Alias: RProtVis, RProtViz
● 0 images

RforProteomics (Package: RforProteomics) : Opens the RforProteomics vignette

Opens the package vignettes.

● Data Source: BioConductor
● Keywords:
● Alias: RforProteomics
● 0 images

downloadData (Package: RforProteomics) : Download a file

Unless already present, downloads src in the destdir directory.

● Data Source: BioConductor
● Keywords:
● Alias: downloadData
● 0 images

getPXD000001mzData (Package: RforProteomics) : Download the PXD000001 mzTab file

Unless already present, downloads the PXD000001 mzData file in the destdir directory. The resulting file is named PRIDE_Exp_Complete_Ac_22134.xml

● Data Source: BioConductor
● Keywords:
● Alias: getPXD000001mzData
● 0 images

getPXD000001mzTab (Package: RforProteomics) : Download the PXD000001 mzTab file

Unless already present, downloads the PXD000001 mzTab file in the destdir directory. The resulting file is named F063721.dat-mztab.txt.

● Data Source: BioConductor
● Keywords:
● Alias: getPXD000001mzTab
● 0 images

getPXD000001mzXML (Package: RforProteomics) : Download the PXD000001 mzXML file

Unless already present, downloads the PXD000001 mzXML file in the destdir directory. The resulting file is named TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01.mzXML.

● Data Source: BioConductor
● Keywords:
● Alias: getPXD000001mzXML
● 0 images

getPackagesInBiocView (Package: RforProteomics) : Packages in a biocView

Finds the package names that have a specific biocView.

● Data Source: BioConductor
● Keywords:
● Alias: getPackagesInBiocView
● 0 images

getThermoHelaPRTC (Package: RforProteomics) : Dowload Thermo Hela PRTC data

Downloads on of multiple Thermo Hela/PRTC data files.

● Data Source: BioConductor
● Keywords:
● Alias: getThermoHelaPRTC
● 0 images

packageDF (Package: RforProteomics) : Package descriptions

Format a BiocView as a data.frame.

● Data Source: BioConductor
● Keywords:
● Alias: packageDF
● 0 images

proteomicsPackages (Package: RforProteomics) :

Searches for all the packages with the "Proteomics" (software), "MassSpectrometry" (software) and "MassSepctrometryData" (data) packages and return their names, titles and versions as a data.frame. The (unexported but documented) underlying functions are RforProteomics:::getPackagesInBiocView (to find relevant package) and RforProteomics:::packageDF (data.frame formatting).

● Data Source: BioConductor
● Keywords:
● Alias: massSpectrometryDataPackages, massSpectrometryPackages, proteomicsPackages
● 0 images