Last data update: 2014.03.03

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CranContrib
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Results 1 - 10 of 116 found.
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tronco.mst.prim (Package: TRONCO) : tronco mst prim

Reconstruct a progression model using Prim algorithm combined with probabilistic causation
● Data Source: BioConductor
● Keywords:
● Alias: tronco.mst.prim
● 0 images

tronco.pattern.plot (Package: TRONCO) : tronco.pattern.plot

tronco.pattern.plot : plot a genotype
● Data Source: BioConductor
● Keywords:
● Alias: tronco.pattern.plot
● 0 images

tronco.plot (Package: TRONCO) : tronco.plot

Plots a progression model from a recostructed dataset
● Data Source: BioConductor
● Keywords:
● Alias: tronco.plot
1 images

view (Package: TRONCO) : view

Print to console a short report of a dataset 'x', which should be a TRONCO compliant dataset - see is.compliant.
● Data Source: BioConductor
● Keywords:
● Alias: view
● 0 images

which.samples (Package: TRONCO) : which.samples

Return a list of samples with specified alteration
● Data Source: BioConductor
● Keywords:
● Alias: which.samples
● 0 images

AND (Package: TRONCO) : AND

AND hypothesis
● Data Source: BioConductor
● Keywords:
● Alias: AND
● 0 images

OR (Package: TRONCO) : OR

OR hypothesis
● Data Source: BioConductor
● Keywords:
● Alias: OR
● 0 images

TCGA.map.clinical.data (Package: TRONCO) : TCGA.map.clinical.data

Map clinical data from the TCGA format
● Data Source: BioConductor
● Keywords:
● Alias: TCGA.map.clinical.data
● 0 images

TCGA.multiple.samples (Package: TRONCO) : TCGA.multiple.samples

Check if there are multiple sample in x, according to TCGA barcodes naming
● Data Source: BioConductor
● Keywords:
● Alias: TCGA.multiple.samples
● 0 images

TCGA.remove.multiple.samples (Package: TRONCO) : TCGA.remove.multiple.samples

If there are multiple sample in x, according to TCGA barcodes naming, remove them
● Data Source: BioConductor
● Keywords:
● Alias: TCGA.remove.multiple.samples
● 0 images