A scatter plot of matrices, with bivariate scatter plots below the diagonal, histograms on the diagonal, and the Pearson correlation above the diagonal. Useful for descriptive statistics of small data sets (better with less than 10 variables).
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.cor.plot
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Calculates values of a series of different evaluations metrics for a model and for a given threshold value
● Data Source:
CranContrib
● Keywords: file
● Alias: ecospat.meva.table
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ecospat.calculate.pd
(Package: ecospat) :
Calculate Phylogenetic Diversity Measures
Calculate all phylogenetic diversity measures listed in Schweiger et al., 2008 (see full reference below).
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.calculate.pd
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Calculates values for True skill statistic (TSS) along different thresholds, considering this time 0.01 increments (i.e. 99 thresholds).
● Data Source:
CranContrib
● Keywords: file
● Alias: ecospat.max.tss
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Calculate the Boyce index as in Hirzel et al. (2006). The Boyce index is used to assess model performance.
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.boyce
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This function projects calibrated ESMs into new space or time.
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.ESM.EnsembleProjection
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K-fold and leave-one-out cross validation for GLM.
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.cv.glm
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Run the cross validation functions on an example data set.
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.cv.example
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Plots the values for True skill statistic (TSS) along different thresholds.
● Data Source:
CranContrib
● Keywords: file
● Alias: ecospat.plot.tss
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Add environmental values to a species dataframe.
● Data Source:
CranContrib
● Keywords:
● Alias: ecospat.sample.envar
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