ecospat

Package: ecospat
Version: 2.0
Date: 2016-05-26
Title: Spatial Ecology Miscellaneous Methods
Authors@R: c(
person("Olivier", "Broennimann", role = "aut", email = "olivier.broennimann@unil.ch"),
person("Valeria", "Di Cola", role = c("cre", "aut"), email = "valeria.dicola@unil.ch"),
person("Blaise", "Petitpierre", role = "ctb"),
person("Frank", "Breiner", role = "ctb"),
person("Manuela", "D`Amen", role = "ctb"),
person("Christophe", "Randin", role = "ctb"),
person("Robin", "Engler", role = "ctb"),
person("Wim", "Hordijk", role = "ctb"),
person("Julien", "Pottier", role = "ctb"),
person("Mirko", "Di Febbraro", role = "ctb"),
person("Loic", "Pellissier", role = "ctb"),
person("Dorothea", "Pio", role = "ctb"),
person("Ruben", "Garcia Mateo", role = "ctb"),
person("Anne", "Dubuis", role = "ctb"),
person("Daniel", "Scherrer", role = "ctb"),
person("Luigi", "Maiorano", role = "ctb"),
person("Achilleas", "Psomas", role = "ctb"),
person("Charlotte", "Ndiribe", role = "ctb"),
person("Nicolas", "Salamin", role = "ctb"),
person("Niklaus", "Zimmermann", role = "ctb"),
person("Antoine", "Guisan", role = "aut", email = "antoine.guisan@unil.ch"))
Author: Olivier Broennimann [aut],
Valeria Di Cola [cre, aut],
Blaise Petitpierre [ctb],
Frank Breiner [ctb],
Manuela D`Amen [ctb],
Christophe Randin [ctb],
Robin Engler [ctb],
Wim Hordijk [ctb],
Julien Pottier [ctb],
Mirko Di Febbraro [ctb],
Loic Pellissier [ctb],
Dorothea Pio [ctb],
Ruben Garcia Mateo [ctb],
Anne Dubuis [ctb],
Daniel Scherrer [ctb],
Luigi Maiorano [ctb],
Achilleas Psomas [ctb],
Charlotte Ndiribe [ctb],
Nicolas Salamin [ctb],
Niklaus Zimmermann [ctb],
Antoine Guisan [aut]
Maintainer: Valeria Di Cola <valeria.dicola@unil.ch>
Depends: ade4 (>= 1.6-2), ape (>= 3.2), gbm (>= 2.1), sp (>= 1.0-15)
Imports: adehabitatHR (>= 0.4.11), adehabitatMA (>= 0.3.8), biomod2 (>=
3.1-64), dismo (>= 0.9-3), ecodist (>= 1.2.9), maptools (>=
0.8-39), randomForest (>= 4.6-7), spatstat (>= 1.37-0), raster
(>= 2.2-31), rms (>= 4.5-0), MigClim (>= 1.6), gtools (>=
3.4.1), PresenceAbsence (>= 1.1.9), methods (>= 3.1.1),
doParallel (>= 1.0.10), foreach (>= 1.4.3), iterators (>=
1.0.8), parallel
Suggests: rgdal (>= 0.8-16), rJava (>= 0.9-6), XML (>= 3.98-1.1)
LazyData: true
URL:
http://www.unil.ch/ecospat/home/menuguid/ecospat-resources/tools.html
Description: Colection of R functions and data sets for the support of spatial ecology analyses with a focus on pre-, core and post- modelling analyses of species distribution, niche quantification and community assembly., written by current and former members and collaborators of the ecospat group of Antoine Guisan, Department of Ecology and Evolution (DEE) & Institute of Earth Surface Dynamics (IDYST), University of Lausanne, Switzerland.
License: GPL
NeedsCompilation: no
Packaged: 2016-05-26 13:46:13 UTC; vdicolab
Repository: CRAN
Date/Publication: 2016-05-26 17:29:23

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ecospat' ...
** package 'ecospat' successfully unpacked and MD5 sums checked
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'ecospat'
    finding HTML links ... done
    ecospat-package                         html  
    ecospat.CommunityEval                   html  
    ecospat.ESM.EnsembleModeling            html  
    finding level-2 HTML links ... done

    ecospat.ESM.EnsembleProjection          html  
    ecospat.ESM.Modeling                    html  
    ecospat.ESM.Projection                  html  
    ecospat.Epred                           html  
    ecospat.SESAM.prr                       html  
    ecospat.adj.D2                          html  
    ecospat.binary.model                    html  
    ecospat.boyce                           html  
    ecospat.calculate.pd                    html  
    ecospat.caleval                         html  
    ecospat.co_occurrences                  html  
    ecospat.cohen.kappa                     html  
    ecospat.cons_Cscore                     html  
    ecospat.cor.plot                        html  
    ecospat.cv.example                      html  
    ecospat.cv.gbm                          html  
    ecospat.cv.glm                          html  
    ecospat.cv.me                           html  
    ecospat.cv.rf                           html  
    ecospat.env                             html  
    ecospat.exdet                           html  
    ecospat.grid.clim.dyn                   html  
    ecospat.makeDataFrame                   html  
    ecospat.mantel.correlogram              html  
    ecospat.max.kappa                       html  
    ecospat.max.tss                         html  
    ecospat.maxentvarimport                 html  
    ecospat.mess                            html  
    ecospat.meva.table                      html  
    ecospat.migclim                         html  
    ecospat.mpa                             html  
    ecospat.niche.dyn.index                 html  
    ecospat.niche.equivalency.test          html  
    ecospat.niche.overlap                   html  
    ecospat.niche.similarity.test           html  
    ecospat.npred                           html  
    ecospat.occ.desaggregation              html  
    ecospat.permut.glm                      html  
    ecospat.plot.contrib                    html  
    ecospat.plot.kappa                      html  
    ecospat.plot.mess                       html  
    ecospat.plot.niche                      html  
    ecospat.plot.niche.dyn                  html  
    ecospat.plot.overlap.test               html  
    ecospat.plot.tss                        html  
    ecospat.rand.pseudoabsences             html  
    ecospat.sample.envar                    html  
    ecospat.shift.centroids                 html  
    ecospat.testData                        html  
    ecospat.testNiche                       html  
    ecospat.testNiche.inv                   html  
    ecospat.testNiche.nat                   html  
    ecospat.testTree                        html  
    ecospat.varpart                         html  
** building package indices
** testing if installed package can be loaded
* DONE (ecospat)
Making 'packages.html' ... done