g.stats
(Package: hierfstat) :
Calculates likelihood-ratio G-statistic on contingency table
Calculates the likelihood ratio G-statistic on a contingency table of alleles at one locus X sampling unit. The sampling unit could be any hierarchical level
● Data Source:
CranContrib
● Keywords: univar
● Alias: g.stats
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varcomp.glob
(Package: hierfstat) :
Estimate variance components and hierarchical F-statistics over all loci
Return multilocus estimators of variance components and F-statistics
● Data Source:
CranContrib
● Keywords: univar
● Alias: varcomp.glob
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qn2.read.fstat
(Package: hierfstat) :
Read QuantiNemo extended format for genotype files
Read QuantiNemo (http://www2.unil.ch/popgen/softwares/quantinemo/) genotype files extended format (option 2)
● Data Source:
CranContrib
● Keywords:
● Alias: qn2.read.fstat
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eucl.dist
(Package: hierfstat) :
Estimates euclidian distances
Estimates euclidian distances among pairs of samples from a gnetic data set
● Data Source:
CranContrib
● Keywords: univar
● Alias: eucl.dist
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Write a genotype data set to a file in the structure format
● Data Source:
CranContrib
● Keywords: miscellaneous
● Alias: write.struct
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varcomp
(Package: hierfstat) :
Estimates variance components for each allele of a locus
Estimates variance components for each allele for a (fully) hierarchical random design defined by all but the last column of the data frame data, the last column containing the genetic data to analyse. Columns for the hierarchical design should be given from the outermost to the innermost before the individual (e.g. continent, region, population, patch,...)
● Data Source:
CranContrib
● Keywords: univar
● Alias: varcomp
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indpca
(Package: hierfstat) :
PCA on a matrix of individuals genotypes frequencies
Carry out a PCA on the centered matrix of individual's allele frequencies.
● Data Source:
CranContrib
● Keywords: multivariate
● Alias: indpca, plot.indpca, print.indpca
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Counts the number of copies of the different alleles at each locus and population
● Data Source:
CranContrib
● Keywords: univar
● Alias: allele.count
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sexbias.test
(Package: hierfstat) :
Test for sex biased dispersal
Test whether one sex disperses more than the other using the method described in Goudet etal. (2002)
● Data Source:
CranContrib
● Keywords:
● Alias: sexbias.test
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Counts the number of individual genotyped per locus and population
● Data Source:
CranContrib
● Keywords: univar
● Alias: ind.count
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providing 
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