OPCr
(Package: molaR) :
Calculate average orientation patch count after several rotations
A function that calls OPC iteratively after rotating mesh a selected number of degrees around the Z-axis following Evans and Jernvall (2009) Patterns and constraints in carnivoran and rodent dental complexity and tooth size. J Vert Paleo 29:24A
● Data Source:
CranContrib
● Keywords:
● Alias: OPCr
●
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molaR_Clean
(Package: molaR) :
Clean up problem ply files
Function will remove floating verticies, and faces with zero area. These can cause issues when using molaR's primary functions of DNE, RFI, and OPC
● Data Source:
CranContrib
● Keywords:
● Alias: molaR_Clean
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DNE_Legend
(Package: molaR) :
Make legend for DNE3d plot
plotting subfunction
● Data Source:
CranContrib
● Keywords:
● Alias: DNE_Legend
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OPC3d
(Package: molaR) :
Plot results of OPC analysis of a surface
A function that produces a three-dimensional rendering of face orientation on a surface. The OPC function will identify the orientations of mesh faces and assign them to patches. It must be performed prior to using the OPC3d function.
● Data Source:
CranContrib
● Keywords:
● Alias: OPC3d
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vertex_to_face_list
(Package: molaR) :
function for making a list of faces on each vertex
crucial function for getting a list of faces which will gather the faces per vertex.
● Data Source:
CranContrib
● Keywords:
● Alias: vertex_to_face_list
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RFI_Legend
(Package: molaR) :
function for building a legend for RFI
crucial plotting subfunction for RFI3d
● Data Source:
CranContrib
● Keywords:
● Alias: RFI_Legend
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Face_Normals
(Package: molaR) :
Function to find Face Normals
This function re-computes the face normals in a way consistent with MorphoTester.
● Data Source:
CranContrib
● Keywords:
● Alias: Face_Normals
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RFI
(Package: molaR) :
Calculate Boyer's (2008) relief index for a surface
A function that calculates relief index following Boyer (2008) Relief index of second mandibular molars is a correlate of diet among prosimian primates and other mammals. J Hum Evol 55:1118-1137 doi: 10.1016/j.jhevol.2008.08.002
● Data Source:
CranContrib
● Keywords:
● Alias: RFI
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Directional_Bins
(Package: molaR) :
This bins the faces into directional categories
bins into 8 directional categories on the basis of their orientations
● Data Source:
CranContrib
● Keywords:
● Alias: Directional_Bins
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DNE3d
(Package: molaR) :
Plot results of a DNE analysis of a surface
plotting function
● Data Source:
CranContrib
● Keywords:
● Alias: DNE3d
●
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providing 
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