R Graphical Manual

Last data update: 2014.03.03

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Results 1 - 10 of 22 found.
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getIndices,ncdfFlowSet,character-method (Package: ncdfFlow) : code{getIndices

These functions are mainly for internal usage and normally not to be used by users.

● Data Source: BioConductor
● Keywords:
● Alias: getIndices, getIndices,ncdfFlowSet,character-method, initIndices, initIndices,ncdfFlowSet-method, updateIndices, updateIndices,ncdfFlowSet,character,logical-method
● 0 images

as.flowSet (Package: ncdfFlow) : convert from a code{ncdfFlowSet

The main purpose of this API is to convert the archived data (stored in ncdfFlowSet) to flowSet when the speed is more concerned than memory effieciency. Although ncdfFlowSet is designed to minimize the disk-IO cost, so usually it is not necessary to do such coersion.

● Data Source: BioConductor
● Keywords:
● Alias: as.flowSet
● 0 images

clone.ncdfFlowSet (Package: ncdfFlow) : Clone a ncdfFlowSet

Create a new ncdfFlowSet object from an existing one

● Data Source: BioConductor
● Keywords:
● Alias: clone.ncdfFlowSet
● 0 images

[[,ncdfFlowSet,ANY-method (Package: ncdfFlow) : extract a code{flowFrame

Simliar to [[, and there are cerntain ways to reduce the disk IO and optimize the speed.

● Data Source: BioConductor
● Keywords:
● Alias: [[,ncdfFlowList,character,missing-method, [[,ncdfFlowList,character-method, [[,ncdfFlowList,logical-method, [[,ncdfFlowList,numeric-method, [[,ncdfFlowSet,ANY-method
● 0 images

filter,ncdfFlowList,filter-method (Package: ncdfFlow) : Accessors compatible with those for code{flowSet

Accessors compatible with those for flowSet

● Data Source: BioConductor
● Keywords:
● Alias: colnames,ncdfFlowList-method, colnames<-, colnames<-,ncdfFlowList-method, colnames<-,ncdfFlowSet,ANY-method, colnames<-,ncdfFlowSet-method, compensate,ncdfFlowSet,ANY-method, filter,ncdfFlowList,filter-method, length,ncdfFlowList-method, markernames,ncdfFlowList-method, markernames<-,ncdfFlowList-method, pData,ncdfFlowList-method, pData<-,ncdfFlowList,data.frame-method, phenoData,ncdfFlowList-method, phenoData<-,ncdfFlowList,AnnotatedDataFrame-method, sampleNames,ncdfFlowList-method, sampleNames<-, sampleNames<-,ncdfFlowSet,ANY-method, transform,ncdfFlowSet-method
● 0 images

getFileName (Package: ncdfFlow) : get the cdf file name associated with ncdfFlowSet object

get the cdf file name associated with ncdfFlowSet object

● Data Source: BioConductor
● Keywords:
● Alias: getFileName
● 0 images

lapply,ncdfFlowList-method (Package: ncdfFlow) : lapply method for ncdfFlowList

Depending on level parameter, loop either iterates through the list of ncdfFlowSet objects or everyflowFrame objects.

● Data Source: BioConductor
● Keywords:
● Alias: lapply,ncdfFlowList-method
● 0 images

ncdfFlow (Package: ncdfFlow) : ncdfFlow: A package that provides CDF storage based flow cytometry data analysis.

ncdfFlow: A package that provides CDF storage based flow cytometry data analysis.

● Data Source: BioConductor
● Keywords: package
● Alias: ncdfFlow, ncdfFlow-package
● 0 images

ncdfFlowList-class (Package: ncdfFlow) : a class that stores multiple ncdfFlowSet objects

It is a list of ncdfFlowSet objects

● Data Source: BioConductor
● Keywords:
● Alias: ncdfFlowList, ncdfFlowList-class, show,ncdfFlowList-method
● 0 images

Subset,ncdfFlowSet,filterResultList-method (Package: ncdfFlow) : subset a ncdfFlowSet by filter

Equivalent to Subset method for flowSet.

● Data Source: BioConductor
● Keywords:
● Alias: Subset,ncdfFlowList,filter-method, Subset,ncdfFlowList,filterResultList-method, Subset,ncdfFlowSet,filter-method, Subset,ncdfFlowSet,filterResultList-method, Subset,ncdfFlowSet,list-method
● 0 images