mrnet
(Package: parmigene) :
Maximum Relevance Minimum Redundancy
A function that infers the interaction network using the MRNET algorithm.
● Data Source:
CranContrib
● Keywords:
● Alias: mrnet
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knnmi
(Package: parmigene) :
Parallel Mutual Information Estimation
A function to perform a parallel estimation of the mutual information of vectors x and y using entropy estimates from K-nearest neighbor distances.
● Data Source:
CranContrib
● Keywords:
● Alias: knnmi
●
0 images
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knnmi.cross
(Package: parmigene) :
Parallel Mutual Information Estimation Between the Rows of Two Matrices
A function that estimates the mutual information between all pairs of rows of matrices mat1 and mat2 using entropy estimates from K-nearest neighbor distances.
● Data Source:
CranContrib
● Keywords:
● Alias: knnmi.cross
●
0 images
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knnmi.all
(Package: parmigene) :
Parallel Mutual Information Estimation Between All Matrix Rows
A function that computes the mutual information between all pairs of rows of matrix mat using entropy estimates from K-nearest neighbor distances.
● Data Source:
CranContrib
● Keywords:
● Alias: knnmi.all
●
0 images
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clr
(Package: parmigene) :
Context Likelihood or Relatedness Network
A function that infers the interaction network using the CLR algorithm.
● Data Source:
CranContrib
● Keywords:
● Alias: clr
●
0 images
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aracne.m
(Package: parmigene) :
Algorithm for the Reconstruction of Accurate Cellular Networks
A function that implements the ARACNE algorithm for the reconstruction of gene interaction networks (multiplicative model).
● Data Source:
CranContrib
● Keywords:
● Alias: aracne.m
●
0 images
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aracne.a
(Package: parmigene) :
Algorithm for the Reconstruction of Accurate Cellular Networks
A function that implements the ARACNE algorithm for the reconstruction of gene interaction networks (additive model).
● Data Source:
CranContrib
● Keywords:
● Alias: aracne.a
●
0 images
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