R Graphical Manual

Last data update: 2014.03.03

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Classification

Results 1 - 10 of 58 found.
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Layout-class (Package: rsbml) : SBML type "Layout"

Contains the glyphs and other graphical objects that compose an SBML layout. Layouts are not part of the core SBML specification. See the reference for the SBML layout extension specification.

● Data Source: BioConductor
● Keywords: classes
● Alias: Layout-class, additionalGraphicalObjects, additionalGraphicalObjects,Layout-method, additionalGraphicalObjects<-, additionalGraphicalObjects<-,Layout-method, compartmentGlyphs, compartmentGlyphs,Layout-method, compartmentGlyphs<-, compartmentGlyphs<-,Layout-method, dimensions, dimensions,Layout-method, dimensions<-, dimensions<-,Layout-method, id,Layout-method, id<-,Layout-method, reactionGlyphs, reactionGlyphs,Layout-method, reactionGlyphs<-, reactionGlyphs<-,Layout-method, speciesGlyphs, speciesGlyphs,Layout-method, speciesGlyphs<-, speciesGlyphs<-,Layout-method, textGlyphs, textGlyphs,Layout-method, textGlyphs<-, textGlyphs<-,Layout-method
● 0 images

LineSegment-class (Package: rsbml) : SBML type "LineSegment"

Describes a simple A-B line.

● Data Source: BioConductor
● Keywords: classes
● Alias: LineSegment-class, end, end,LineSegment-method, end<-, end<-,LineSegment-method, start, start,LineSegment-method, start<-, start<-,LineSegment-method
● 0 images

Model-class (Package: rsbml) : SBML type "Model"

The central SBML element. Contains the Species, Reactions, Compartments and other components of the model. See the SBML specification, at the reference, for further details.

● Data Source: BioConductor
● Keywords: classes
● Alias: Model-class, compartmentTypes, compartmentTypes,Model-method, compartmentTypes<-, compartmentTypes<-,Model-method, compartments, compartments,Model-method, compartments<-, compartments<-,Model-method, constraints, constraints,Model-method, constraints<-, constraints<-,Model-method, events, events,Model-method, events<-, events<-,Model-method, functionDefinitions, functionDefinitions,Model-method, functionDefinitions<-, functionDefinitions<-,Model-method, id,Model-method, id<-,Model-method, initialAssignments, initialAssignments,Model-method, initialAssignments<-, initialAssignments<-,Model-method, layouts, layouts,Model-method, layouts<-, layouts<-,Model-method, modelHistory, modelHistory,Model-method, modelHistory<-, modelHistory<-,Model-method, name,Model-method, name<-,Model-method, parameters, parameters,Model-method, parameters<-, parameters<-,Model-method, reactions, reactions,Model-method, reactions<-, reactions<-,Model-method, rules, rules,Model-method, rules<-, rules<-,Model-method, species,Model-method, species<-,Model-method, speciesTypes, speciesTypes,Model-method, speciesTypes<-, speciesTypes<-,Model-method, stoichiometryMatrix, stoichiometryMatrix,Model-method, unitDefinitions, unitDefinitions,Model-method, unitDefinitions<-, unitDefinitions<-,Model-method
● 0 images

ModelCreator-class (Package: rsbml) : SBML Type "ModelCreator"

Information, such as name, email and organization, about a creator of an SBML model.

● Data Source: BioConductor
● Keywords: classes
● Alias: ModelCreator-class, email, email,ModelCreator-method, email<-, email<-,ModelCreator-method, familyName, familyName,ModelCreator-method, familyName<-, familyName<-,ModelCreator-method, givenName, givenName,ModelCreator-method, givenName<-, givenName<-,ModelCreator-method, organization, organization,ModelCreator-method, organization<-, organization<-,ModelCreator-method
● 0 images

ModelHistory-class (Package: rsbml) : SBML Type "ModelHistory"

Stores the history of an SBML model, including the created/modified dates and the creators.

● Data Source: BioConductor
● Keywords: classes
● Alias: ModelHistory-class, OptionalModelHistory-class, createdDate, createdDate,ModelHistory-method, createdDate<-, createdDate<-,ModelHistory,POSIXt-method, createdDate<-,ModelHistory,character-method, creators, creators,ModelHistory-method, creators<-, creators<-,ModelHistory-method, modifiedDate, modifiedDate,ModelHistory-method, modifiedDate<-, modifiedDate<-,ModelHistory,POSIXt-method, modifiedDate<-,ModelHistory,character-method, modifiedDate<-,ModelHistory-method
● 0 images

ModifierSpeciesReference-class (Package: rsbml) : SBML type "ModifierSpeciesReference"

Identifies a Species that modifies the parent Reaction.

● Data Source: BioConductor
● Keywords: classes
● Alias: ModifierSpeciesReference-class
● 0 images

Parameter-class (Package: rsbml) : SBML type "Parameter"

Declares a variable to be used in a mathematical expression.

● Data Source: BioConductor
● Keywords: classes
● Alias: Parameter-class, constant,Parameter-method, constant<-,Parameter-method, id,Parameter-method, id<-,Parameter-method, name,Parameter-method, name<-,Parameter-method, units,Parameter-method, units<-,Parameter-method, value, value,Parameter-method, value<-, value<-,Parameter-method
● 0 images

ParameterRule-class (Package: rsbml) : SBML type "ParameterRule"

Obsolete rule that controls the value of a Parameter.

● Data Source: BioConductor
● Keywords: classes
● Alias: ParameterRule-class, math,ParameterRule-method, math<-,ParameterRule-method, name,ParameterRule-method, name<-,ParameterRule-method, type,ParameterRule-method, type<-,ParameterRule-method, units,ParameterRule-method, units<-,ParameterRule-method, variable,ParameterRule-method, variable<-,ParameterRule-method
● 0 images

Point-class (Package: rsbml) : SBML type "Point"

Specifies a position in 3D space.

● Data Source: BioConductor
● Keywords: classes
● Alias: Point-class, x, x,Point-method, x<-, x<-,Point-method, y, y,Point-method, y<-, y<-,Point-method, z, z,Point-method, z<-, z<-,Point-method
● 0 images

RateRule-class (Package: rsbml) : SBML type "RateRule"

An equation that describes the rate of change in the quantity of a Species, the size of a Compartment or the value of a Parameter.

● Data Source: BioConductor
● Keywords: classes
● Alias: RateRule-class, variable, variable,RateRule-method, variable<-, variable<-,RateRule-method
● 0 images