R Graphical Manual

Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
All

Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 10 of 52 found.
[1] < 1 2 3 4 5 6 > [6] Sort:

getSubtree (Package: treeman) : Get subtree

Return tree descending from id.

● Data Source: CranContrib
● Keywords:
● Alias: getSubtree
● 0 images

getNdSlt (Package: treeman) : Get a node slot

Returns the value of named slot.

● Data Source: CranContrib
● Keywords:
● Alias: getNdSlt
● 0 images

getNdsAge (Package: treeman) : Get ages for multiple nodes

Return the root to tip distances for ids.

● Data Source: CranContrib
● Keywords:
● Alias: getNdsAge
● 0 images

TreeMen-class (Package: treeman) : TreeMen-class

S4 class for multiple phylogenetic trees

● Data Source: CranContrib
● Keywords:
● Alias: TreeMen-class, TreeMen-method, [,TreeMen,character-method, [[,TreeMen,ANY-method, as.character,TreeMen-method, cTrees,TreeMen-method, print,TreeMen-method, show,TreeMen-method, str,TreeMen-method
● 0 images

addTip (Package: treeman) : Add tip to a tree

Returns a tree with a tip ID added

● Data Source: CranContrib
● Keywords:
● Alias: addTip
● 0 images

getSpnsAge (Package: treeman) : Get age ranges for multiple nodes

Return start and end root to tip distances for ids.

● Data Source: CranContrib
● Keywords:
● Alias: getSpnsAge
● 0 images

getNdsPrid (Package: treeman) : Get pre-nodes to root for multiple nodes

Return node ids for connecting ids to root.

● Data Source: CranContrib
● Keywords:
● Alias: getNdsPrid
● 0 images

calcNdBlnc (Package: treeman) : Calculate the balance of a node

Returns the balance of a node.

● Data Source: CranContrib
● Keywords:
● Alias: calcNdBlnc
● 0 images

TreeMan-class (Package: treeman) : TreeMan-class

S4 class for representing phylogenetic trees as a list of nodes.

● Data Source: CranContrib
● Keywords:
● Alias: TreeMan-class, TreeMan-method, [,TreeMan,character-method, [[,TreeMan,character-method, as.character,TreeMan-method, cTrees,TreeMan-method, print,TreeMan-method, show,TreeMan-method, str,TreeMan-method
● 0 images

getNdLng (Package: treeman) : Get lineage

Return unique taxonyms for connecting id to root.

● Data Source: CranContrib
● Keywords:
● Alias: getNdLng
● 0 images