ARTP2

Package: ARTP2
Type: Package
Title: Pathway and Gene-Level Association Test
Version: 0.9.22
Date: 2016-02-11
Author: Han Zhang, Bill Wheeler, Kai Yu, Yifan Yang
Maintainer: Han Zhang <han.zhang2@nih.gov>
Depends: R (>= 2.10), Formula, data.table, stats, utils, parallel
Description: Pathway and gene level association test using raw data or summary statistics.
License: GPL-2 | GPL-3
URL: https://github.com/zhangh12/ARTP2
BugReports: https://github.com/zhangh12/ARTP2/issues
SystemRequirements: C++11
NeedsCompilation: yes
Packaged: 2016-02-11 18:17:50 UTC; zhangh12
Repository: CRAN
Date/Publication: 2016-02-12 00:57:40

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'ARTP2' ...
** package 'ARTP2' successfully unpacked and MD5 sums checked
** libs
g++ -std=c++11 -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2 -c ReadBED.cpp -o ReadBED.o
g++ -std=c++11 -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2 -c artp2.cpp -o artp2.o
g++ -std=c++11 -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2 -c check_nthread.cpp -o check_nthread.o
g++ -std=c++11 -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2 -c check_os.cpp -o check_os.o
g++ -std=c++11 -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include   -fopenmp -fpic  -g -O2 -c test.cpp -o test.o
g++ -std=c++11 -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o ARTP2.so ReadBED.o artp2.o check_nthread.o check_os.o test.o -fopenmp -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/ARTP2/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'ARTP2'
    finding HTML links ... done
    ARTP2-package                           html  
    data                                    html  
    geno                                    html  
    meta                                    html  
    options                                 html  
    options.default                         html  
    pathway                                 html  
    rARTP                                   html  
    read.bed                                html  
    ref.geno                                html  
    sARTP                                   html  
    subj.id                                 html  
    warm.start                              html  
** building package indices
** testing if installed package can be loaded
* DONE (ARTP2)
Making 'packages.html' ... done