R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
BioConductor
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Results 1 - 8 of 8 found.
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meta (Package: ARTP2) :

Perform the single-marker meta-analysis.

● Data Source: CranContrib
● Keywords:
● Alias: meta
● 0 images

read.bed (Package: ARTP2) : Data input

Loads genotype data from plink format files .bed, .bim, and .fam.

● Data Source: CranContrib
● Keywords:
● Alias: read.bed
● 0 images

warm.start (Package: ARTP2) :

This function is designed to accelerate the ARTP2 test in practice. It uses pre-calculated and reusable statistics as input and allow the users to try different testing configuration more efficiently. See Details for more information.

● Data Source: CranContrib
● Keywords:
● Alias: warm.start
● 0 images

options.default (Package: ARTP2) :

A function to return default options in sARTP and rARTP. This page is for illustration. Users do not need to call this function explicitly.

● Data Source: CranContrib
● Keywords:
● Alias: options.default
● 0 images

options (Package: ARTP2) : options

The list to describe the options that are used in sARTP, rARTP. It will be set by function options.default by default.

● Data Source: CranContrib
● Keywords:
● Alias: options
● 0 images

sARTP (Package: ARTP2) : ARTP test for summary data

Calculate gene and pathway p-values using the ARTP test and summary data.

● Data Source: CranContrib
● Keywords:
● Alias: sARTP
● 0 images

rARTP (Package: ARTP2) : ARTP test for raw data

Calculate gene and pathway p-values using the ARTP test and raw genotype data

● Data Source: CranContrib
● Keywords:
● Alias: rARTP
● 0 images

ARTP2-package (Package: ARTP2) :

Pathway and gene level association test using raw data or summary statistics.

● Data Source: CranContrib
● Keywords: pathway
● Alias: ARTP2, ARTP2-package
● 0 images