COMBIA

Encoding: UTF-8
Package: COMBIA
Type: Package
Title: Synergy/Antagonism Analyses of Drug Combinations
Version: 1.0-4
Date: 2015-07-24
Author: Muhammad Kashif
Maintainer: Muhammad Kashif <Muhammad.Kashif@medsci.uu.se>
Description: A comprehensive synergy/antagonism analyses of drug combinations with
quality graphics and data. The analyses can be performed by Bliss independence and Loewe
additivity models. COMBIA provides improved statistical analysis and makes only very weak assumption of data variability
while calculating bootstrap intervals (BIs). Finally, package saves analyzed data,
2D and 3D plots ready to use in research publications. COMBIA does not require manual
data entry. Data can be directly input from wetlab experimental platforms
for example fluostar, automated robots etc. One needs to call a single function only
to perform all analysis (examples are provided with sample data).
Depends: hash, gdata, lattice, latticeExtra, oro.nifti
Imports: grDevices, stats, utils
License: GPL (>= 2)
LazyLoad: yes
NeedsCompilation: no
Packaged: 2015-07-26 08:41:27 UTC; dawood
Repository: CRAN
Date/Publication: 2015-07-26 18:53:01

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'COMBIA' ...
** package 'COMBIA' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'COMBIA'
    finding HTML links ... done
    applyBliss                              html  
    applyLoewe                              html  
    cVCal                                   html  
    calculateSynergy                        html  
    combineDataFromMultipleFiles            html  
    createUniquePertbs                      html  
    extractKey                              html  
    extractReplicateValues                  html  
    extractValuesFromRange                  html  
    loeweModel                              html  
    readFMCAValues                          html  
    readFile                                html  
    readFluostarPlates                      html  
    readMacSynergyValues                    html  
    readOtherValues                         html  
    removeOutliers                          html  
    selectPlate                             html  
    synAntPlot                              html  
    synergySignificant                      html  
** building package indices
** testing if installed package can be loaded
* DONE (COMBIA)
Making 'packages.html' ... done