DBChIP

Package: DBChIP
Type: Package
Title: Differential Binding of Transcription Factor with ChIP-seq
Version: 1.16.0
Date: 2012-06-21
Author: Kun Liang
Maintainer: Kun Liang <kliang@stat.wisc.edu>
Depends: R (>= 2.15.0), edgeR, DESeq
Suggests: ShortRead, BiocGenerics
Description: DBChIP detects differentially bound sharp binding sites
across multiple conditions, with or without matching control
samples.
License: GPL (>= 2)
LazyLoad: yes
biocViews: ChIPSeq, Sequencing, Transcription, Genetics
NeedsCompilation: no
Packaged: 2016-05-04 04:37:20 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'DBChIP' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'DBChIP'
    finding HTML links ... done
    DBChIP-package                          html  
    DBChIP                                  html  
    PHA4                                    html  
    binding.site.list                       html  
    chip.data.list                          html  
    conds                                   html  
    get.site.count                          html  
    input.data.list                         html  
    load.data                               html  
    plotPeak                                html  
    read.binding.site.list                  html  
    report.peak                             html  
    site.merge                              html  
    test.diff.binding                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (DBChIP)
Making 'packages.html' ... done