DeconRNASeq

Package: DeconRNASeq
Type: Package
Title: Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data
Version: 1.14.0
Date: 2013-01-22
Author: Ting Gong <tinggong@gmail.com> Joseph D. Szustakowski
<joseph.szustakowski@novartis.com>
Depends: R (>= 2.14.0), limSolve, pcaMethods, ggplot2, grid
Maintainer: Ting Gong <tinggong@gmail.com>
Description: DeconSeq is an R package for deconvolution of
heterogeneous tissues based on mRNA-Seq data. It modeled
expression levels from heterogeneous cell populations in
mRNA-Seq as the weighted average of expression from different
constituting cell types and predicted cell type proportions of
single expression profiles.
License: GPL-2
Packaged: 2016-05-04 04:43:58 UTC; biocbuild
biocViews: DifferentialExpression
NeedsCompilation: no

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'DeconRNASeq' ...
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'DeconRNASeq'
    finding HTML links ... done
    DeconRNASeq-package                     html  
    DeconRNASeq                             html  
    all.datasets                            html  
    array.proportions                       html  
    array.signatures                        html  
    condplot                                html  
    datasets                                html  
    decon.bootstrap                         html  
    fraction                                html  
    liver_kidney                            html  
    multi_tissue                            html  
    multiplot                               html  
    proportions                             html  
    rmse                                    html  
    signatures                              html  
    x.data                                  html  
    x.signature                             html  
    x.signature.filtered                    html  
    x.signature.filtered.optimal            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (DeconRNASeq)
Making 'packages.html' ... done