GSEABase

Package: GSEABase
Type: Package
Title: Gene set enrichment data structures and methods
Version: 1.34.0
Author: Martin Morgan, Seth Falcon, Robert Gentleman
Maintainer: Bioconductor Package Maintainer
<maintainer@bioconductor.org>
Description: This package provides classes and methods to support Gene
Set Enrichment Analysis (GSEA).
License: Artistic-2.0
Depends: R (>= 2.6.0), BiocGenerics (>= 0.13.8), Biobase (>= 2.17.8),
annotate (>= 1.45.3), methods, graph (>= 1.37.2)
Suggests: hgu95av2.db, GO.db, org.Hs.eg.db, Rgraphviz, ReportingTools
Imports: AnnotationDbi, XML
LazyLoad: yes
Collate: utilities.R AAA.R AllClasses.R AllGenerics.R getObjects.R
methods-CollectionType.R methods-ExpressionSet.R
methods-GeneColorSet.R methods-GeneIdentifierType.R
methods-GeneSet.R methods-GeneSetCollection.R
methods-OBOCollection.R
biocViews: GeneExpression, GeneSetEnrichment, GraphAndNetwork, GO, KEGG
NeedsCompilation: no
Packaged: 2016-05-04 03:00:53 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'GSEABase' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'GSEABase'
    finding HTML links ... done
    CollectionType-class                    html  
    CollectionType-constructors             html  
    GSEABase-package                        html  
    GeneColorSet-class                      html  
    GeneColorSet-methods                    html  
    GeneIdentifierType-class                html  
    GeneIdentifierType-constructors         html  
    GeneSet-class                           html  
    GeneSet-methods                         html  
    GeneSetCollection-class                 html  
    GeneSetCollection-methods               html  
    OBOCollection-class                     html  
    details-methods                         html  
    getOBOCollection                        html  
    getObjects                              html  
    goSlim-methods                          html  
    incidence-methods                       html  
    mapIdentifiers-methods                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GSEABase)
Making 'packages.html' ... done