Last data update: 2014.03.03


Package: GeoDE
Type: Package
Title: A geometrical Approach to Differential expression and gene-set
Version: 1.0
Date: 2014-06-06
Author: Neil R. Clark and Avi Ma'ayan
Maintainer: Neil Clark <>
Description: Given expression data this package calculate a multivariate
geometrical characterization of the differential expression and can also
perform gene-set enrichment.
License: GPL-2
Depends: R (>= 2.10), Matrix, MASS
Packaged: 2014-07-30 21:26:23 UTC; Neil Clark
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-07-31 07:17:53

20 images, 4 functions, 5 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'GeoDE' ...
** package 'GeoDE' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'GeoDE'
    finding HTML links ... done
    AllGMTfiles                             html  
    GeoDE-package                           html  
    PAEAAnalysis                            html  
    chdirAnalysis                           html  
    example_expression_data                 html  
    example_gammas                          html  
    example_sampleclass                     html  
    gmt                                     html  
    multigmtPAEAAnalysis                    html  
** building package indices
** testing if installed package can be loaded
* DONE (GeoDE)
Making 'packages.html' ... done