HWxtest

Package: HWxtest
Type: Package
Title: Exact Tests for Hardy-Weinberg Proportions
Version: 1.1.7
Date: 2015-12-22
Author: Bill Engels <wrengels@wisc.edu>
Maintainer: Bill Engels <wrengels@wisc.edu>
Description: Tests whether a set of genotype counts fits the HW expectations.
Exact tests performed by an efficient algorithm. Included test statistics
are likelihood ratio, probability, U-score and Pearson's X2.
VignetteBuilder: knitr, RefManageR
Depends: R (>= 2.14)
Suggests: ggplot2, rmarkdown, knitr, RefManageR, adegenet, genetics,
parallel
NeedsCompilation: yes
License: GPL
RoxygenNote: 5.0.0
Packaged: 2016-01-13 19:20:44 UTC; WRE
Repository: CRAN
Date/Publication: 2016-01-13 23:01:13

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'HWxtest' ...
** package 'HWxtest' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c HWmtest.c -o HWmtest.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c HWxcount.c -o HWxcount.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c HWxtest.c -o HWxtest.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o HWxtest.so HWmtest.o HWxcount.o HWxtest.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/HWxtest/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'HWxtest'
    finding HTML links ... done
    HWcases                                 html  
    acount                                  html  
    genepop.to.genind                       html  
    histogramFunctions                      html  
    hwdf                                    html  
    hwx.test                                html  
    listify                                 html  
    mtest                                   html  
    mungeData                               html  
    observedStatistics                      html  
    p.value                                 html  
    print.hwtest                            html  
    whales.df                               html  
    xcount                                  html  
    xcountCutoff                            html  
    xtest                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (HWxtest)
Making 'packages.html' ... done