PhaseType

Package: PhaseType
Title: Inference for Phase-type Distributions
Description: Functions to perform Bayesian inference on absorption time
data for Phase-type distributions. Plans to expand this to
include frequentist inference and simulation tools.
URL: http://www.louisaslett.com/PhaseType/
Version: 0.1.3
Maintainer: Louis Aslett <louis@maths.tcd.ie>
Author: Louis Aslett <louis@maths.tcd.ie>
Depends: coda, ggplot2, reshape
Suggests: actuar
License: GPL-2 | GPL-3
LazyLoad: yes
Packaged: 2012-10-16 16:03:09 UTC; louis
Repository: CRAN
Date/Publication: 2012-10-16 16:24:33

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'PhaseType' ...
** package 'PhaseType' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c LJMA_arms.c -o LJMA_arms.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c PHT_MCMC_Aslett.c -o PHT_MCMC_Aslett.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_eq_AslettHobolth_DCS.c -o Simulate_AbsCTMC_eq_AslettHobolth_DCS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_eq_Aslett_DCS.c -o Simulate_AbsCTMC_eq_Aslett_DCS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_eq_Aslett_ECS.c -o Simulate_AbsCTMC_eq_Aslett_ECS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_eq_Bladt_MHRS.c -o Simulate_AbsCTMC_eq_Bladt_MHRS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_gt_Aslett_DCS.c -o Simulate_AbsCTMC_gt_Aslett_DCS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_gt_Bladt_MHRS.c -o Simulate_AbsCTMC_gt_Bladt_MHRS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c Simulate_AbsCTMC_gt_Hobolth_DCS.c -o Simulate_AbsCTMC_gt_Hobolth_DCS.o
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c utility.c -o utility.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o PhaseType.so LJMA_arms.o PHT_MCMC_Aslett.o Simulate_AbsCTMC_eq_AslettHobolth_DCS.o Simulate_AbsCTMC_eq_Aslett_DCS.o Simulate_AbsCTMC_eq_Aslett_ECS.o Simulate_AbsCTMC_eq_Bladt_MHRS.o Simulate_AbsCTMC_gt_Aslett_DCS.o Simulate_AbsCTMC_gt_Bladt_MHRS.o Simulate_AbsCTMC_gt_Hobolth_DCS.o utility.o -L/home/ddbj/local/lib64/R/lib -lRlapack -L/home/ddbj/local/lib64/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/PhaseType/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'PhaseType'
    finding HTML links ... done
    PhaseType-package                       html  
    phtMCMC                                 html  
    phtMCMC2                                html  
** building package indices
** testing if installed package can be loaded
* DONE (PhaseType)
Making 'packages.html' ... done