QUALIFIER

Package: QUALIFIER
Type: Package
Title: Quality Control of Gated Flow Cytometry Experiments
Version: 1.16.1
Author: Mike Jiang,Greg Finak,Raphael Gottardo
Maintainer: Mike Jiang <wjiang2@fhcrc.org>
Depends: R (>= 2.14.0), flowCore, flowViz, ncdfFlow, flowWorkspace,
data.table, reshape
Imports:
MASS,hwriter,lattice,stats4,flowCore,flowViz,methods,flowWorkspace,latticeExtra,grDevices,tools,
Biobase,XML,grid
Description: Provides quality control and quality assessment tools for gated
flow cytometry data.
License: Artistic-2.0
biocViews: Infrastructure, FlowCytometry, CellBasedAssays
Suggests: RSVGTipsDevice, knitr
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2016-05-16 03:15:56 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'QUALIFIER' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'QUALIFIER'
    finding HTML links ... done
    ITNQASTUDY                              html  
    QUALIFIER-package                       html  
    getQAStats                              html  
    finding level-2 HTML links ... done

    initDB                                  html  
    outlierFunctions                        html  
    plot-methods                            html  
    qaCheck-methods                         html  
Rd warning: /tmp/Rtmp4liFKN/R.INSTALL38045e2c078f/QUALIFIER/man/qaCheck-methods.Rd:40: missing file link 'plot'
Rd warning: /tmp/Rtmp4liFKN/R.INSTALL38045e2c078f/QUALIFIER/man/qaCheck-methods.Rd:131: missing file link 'plot'
    qaPreprocess                            html  
    qaReport                                html  
Rd warning: /tmp/Rtmp4liFKN/R.INSTALL38045e2c078f/QUALIFIER/man/qaReport.Rd:20: missing file link 'plot'
Rd warning: /tmp/Rtmp4liFKN/R.INSTALL38045e2c078f/QUALIFIER/man/qaReport.Rd:63: missing file link 'plot'
    qaTask-class                            html  
    read.qaTask                             html  
    saveToDB                                html  
    save_db                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (QUALIFIER)
Making 'packages.html' ... done