RNAinteractMAPK

Package: RNAinteractMAPK
Type: Package
Title: Mapping of Signalling Networks through Synthetic Genetic
Interaction Analysis by RNAi
Version: 1.10.0
Author: Bernd Fischer <b.fischer@dkfz.de>
Maintainer: Bernd Fischer <b.fischer@dkfz.de>
Description: This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.
License: Artistic-2.0
LazyLoad: yes
Imports: grid, gdata, MASS, genefilter
Depends: R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Suggests: qvalue, lattice
biocViews: ExperimentData, MicrotitrePlateAssayData,
Drosophila_melanogaster_Data, CellCulture
NeedsCompilation: no
Packaged: 2016-05-07 20:20:20 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'RNAinteractMAPK' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'RNAinteractMAPK'
    finding HTML links ... done
    Dmel2PPMAPK                             html  
    finding level-2 HTML links ... done

    ElpB1phenotype                          html  
    MAPK.classifier                         html  
    MAPK.estimate.TPS                       html  
    MAPK.plot.heatmap.raster                html  
    MAPK.report.gene.lists.paper            html  
    MAPK.smooth.scatter                     html  
    Networks                                html  
    PhysicalInteractions                    html  
    RNAinteractMAPK-package                 html  
    cellTiterGlo                            html  
    dsRNAiDilutionSeriesData                html  
    mRNAdoubleKDefficiency                  html  
    mRNAsingleKDefficiency                  html  
    pathwayMembership                       html  
    singleKDphenotype                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (RNAinteractMAPK)
Making 'packages.html' ... done