TPP

Package: TPP
Type: Package
Title: Analyze thermal proteome profiling (TPP) experiments
Version: 2.2.3
Author: Dorothee Childs, Holger Franken, Mikhail Savitski and Wolfgang Huber
Maintainer: Dorothee Childs <dorothee.childs@embl.de>
Depends: R (>= 3.2.0), Biobase, openxlsx (>= 2.4.0), ggplot2 (>= 2.0.0)
Imports: VGAM, reshape2, nls2, foreach, grid, gridExtra, doParallel,
parallel, RColorBrewer, RCurl, plyr, VennDiagram
Suggests: BiocStyle, knitr, testthat
Description: Analyze thermal proteome profiling (TPP) experiments with varying
temperatures (TR) or compound concentrations (CCR).
License: Artistic-2.0
VignetteBuilder: knitr
biocViews: Proteomics, MassSpectrometry
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2016-06-05 05:41:37 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'TPP' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'TPP'
    finding HTML links ... done
    TPP                                     html  
    analyzeTPPCCR                           html  
    analyzeTPPTR                            html  
    hdacCCR_config                          html  
    hdacCCR_data                            html  
    hdacCCR_smallExample                    html  
    hdacTR_config                           html  
    hdacTR_data                             html  
    hdacTR_resultsTable_smallExample        html  
    hdacTR_smallExample                     html  
    resultTable                             html  
    tppDefaultTheme                         html  
    tppExport                               html  
    tppQCPlotsCorrelateExperiments          html  
    tppccrCurveFit                          html  
    tppccrImport                            html  
    tppccrNormalize                         html  
    tppccrNormalizeToReference              html  
    tppccrPlotCurves                        html  
    tppccrResultTable                       html  
    tppccrTransform                         html  
    tpptrAnalyzeMeltingCurves               html  
    tpptrCurveFit                           html  
    tpptrDefaultNormReqs                    html  
    tpptrImport                             html  
    tpptrNormalize                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (TPP)
Making 'packages.html' ... done