Last data update: 2014.03.03

TSCAN

Package: TSCAN
Type: Package
Title: TSCAN: Tools for Single-Cell ANalysis
Version: 1.10.2
Date: 2015-8-15
Author: Zhicheng Ji, Hongkai Ji
Maintainer: Zhicheng Ji <zji4@jhu.edu>
Description: TSCAN enables users to easily construct and tune pseudotemporal
cell ordering as well as analyzing differentially expressed genes. TSCAN
comes with a user-friendly GUI written in shiny. More features will come in
the future.
License: GPL(>=2)
Imports: ggplot2, shiny, plyr, grid, fastICA, igraph, combinat, mgcv,
mclust, gplots
VignetteBuilder: knitr
Suggests: knitr
Depends: R (>= 2.10.0)
biocViews: GeneExpression, Visualization, GUI
NeedsCompilation: no
Packaged: 2016-05-16 04:50:31 UTC; biocbuild

● BiocViews: GUI, GeneExpression, Visualization
2 images, 10 functions, 0 datasets
● Reverse Depends: 0

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'TSCAN' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'TSCAN'
    finding HTML links ... done
    TSCAN                                   html  
    TSCANorder                              html  
    TSCANui                                 html  
    difftest                                html  
    exprmclust                              html  
    lpsdata                                 html  
    orderscore                              html  
    plotmclust                              html  
    preprocess                              html  
    singlegeneplot                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (TSCAN)
Making 'packages.html' ... done