cgdsr

Package: cgdsr
Type: Package
Title: R-Based API for Accessing the MSKCC Cancer Genomics Data Server
(CGDS)
Version: 1.2.5
Date: 2015-08-25
Author: Anders Jacobsen <jacobsen@cbio.mskcc.org>
Maintainer: Augustin Luna <lunaa@cbio.mskcc.org>
Description: Provides a basic set of R functions for querying the Cancer
Genomics Data Server (CGDS), hosted by the Computational Biology Center at
Memorial-Sloan-Kettering Cancer Center (MSKCC).
License: LGPL-3
LazyLoad: yes
URL: https://github.com/cBioPortal/cgdsr
Depends: R (>= 2.12.0)
Imports: R.oo, R.methodsS3
Suggests: testthat
NeedsCompilation: no
Repository: CRAN
Packaged: 2015-08-26 15:18:16 UTC; lunaa
Date/Publication: 2015-08-27 08:38:53

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'cgdsr' ...
** package 'cgdsr' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'cgdsr'
    finding HTML links ... done
    cgdsr-CGDS                              html  
    cgdsr-getCancerStudies                  html  
    cgdsr-getCaseLists                      html  
    cgdsr-getClinicalData                   html  
    cgdsr-getGeneticProfiles                html  
    cgdsr-getMutationData                   html  
    cgdsr-getProfileData                    html  
    cgdsr-package                           html  
    cgdsr-plot                              html  
    cgdsr-processURL                        html  
    cgdsr-setPlotErrorMsg                   html  
    cgdsr-setVerbose                        html  
    cgdsr-test                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (cgdsr)
Making 'packages.html' ... done