corHMM

Package: corHMM
Version: 1.19
Date: 2016-6-6
Title: Analysis of Binary Character Evolution
Author: Jeremy M. Beaulieu <jbeaulieu@nimbios.org>, Jeffrey C. Oliver <jeffreycoliver@gmail.com>, Brian O'Meara <bomeara@utk.edu>
Maintainer: Jeremy Beaulieu <jbeaulieu@nimbios.org>
Depends: ape, nloptr, GenSA
Imports: expm, numDeriv, corpcor, phangorn, parallel
Description: Fits a hidden rates model that allows different transition rate classes on different portions of a phylogeny by treating rate classes as hidden states in a Markov process and various other functions for evaluating models of binary character evolution.
License: GPL (>= 2)
NeedsCompilation: no
Packaged: 2016-06-08 16:09:30 UTC; jeremybeaulieu
Repository: CRAN
Date/Publication: 2016-06-09 06:18:08

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'corHMM' ...
** package 'corHMM' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'corHMM'
    finding HTML links ... done
    ancRECON                                html  
    corDISC                                 html  
    corHMM                                  html  
    corPAINT                                html  
    lewisMkv                                html  
    plotRECON                               html  
    primates                                html  
    rate.mat.maker                          html  
    rayDISC                                 html  
    readNexusMorph                          html  
** building package indices
** testing if installed package can be loaded
* DONE (corHMM)
Making 'packages.html' ... done