domainsignatures

Package: domainsignatures
Type: Package
Title: Geneset enrichment based on InterPro domain signatures
Version: 1.32.0
Author: Florian Hahne, Tim Beissbarth
Maintainer: Florian Hahne <florian.hahne@novartis.com>
Description: Find significantly enriched gene classifications in a list of functionally undescribed genes based on their InterPro domain structure.
Depends: R (>= 2.4.0), KEGG.db, prada, biomaRt, methods
Imports: AnnotationDbi
License: Artistic-2.0
Collate: AllClasses.R methods-ipDataSource.R getKEGGdata.R sage.test.R
compSimilarities.R sim2Pathway.R getKEGGdescription.R
resampleGeneLists.R dataSource.R gseDomain.R
LazyLoad: yes
biocViews: Annotation, Pathways, GeneSetEnrichment
NeedsCompilation: no
Packaged: 2016-05-05 01:59:43 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'domainsignatures' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'domainsignatures'
    finding HTML links ... done
    dataSource                              html  
    domainsignatures-package                html  
    getKEGGdata                             html  
    getKEGGdescription                      html  
    gseDomain                               html  
    ipDataSource-class                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (domainsignatures)
Making 'packages.html' ... done