fdrtool

Package: fdrtool
Version: 1.2.15
Date: 2015-07-07
Title: Estimation of (Local) False Discovery Rates and Higher Criticism
Author: Bernd Klaus and Korbinian Strimmer.
Maintainer: Korbinian Strimmer <strimmerlab@gmail.com>
Depends: R (>= 3.0.2)
Suggests:
Imports: graphics, grDevices, stats
Description: Estimates both tail area-based false
discovery rates (Fdr) as well as local false discovery rates (fdr) for a
variety of null models (p-values, z-scores, correlation coefficients,
t-scores). The proportion of null values and the parameters of the null
distribution are adaptively estimated from the data. In addition, the package
contains functions for non-parametric density estimation (Grenander estimator),
for monotone regression (isotonic regression and antitonic regression with weights),
for computing the greatest convex minorant (GCM) and the least concave majorant (LCM),
for the half-normal and correlation distributions, and for computing
empirical higher criticism (HC) scores and the corresponding decision threshold.
License: GPL (>= 3)
URL: http://strimmerlab.org/software/fdrtool/
Packaged: 2015-07-07 20:55:57 UTC; strimmer
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-07-08 09:50:31

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'fdrtool' ...
** package 'fdrtool' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c isomean.c -o isomean.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o fdrtool.so isomean.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/fdrtool/libs
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'fdrtool'
    finding HTML links ... done
    censored.fit                            html  
    dcor0                                   html  
    fdrtool-internal                        html  
    fdrtool                                 html  
    gcmlcm                                  html  
    grenander                               html  
    halfnorm                                html  
    hc.score                                html  
    monoreg                                 html  
    pval.estimate.eta0                      html  
    pvalues                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (fdrtool)
Making 'packages.html' ... done