gageData

Package: gageData
Type: Package
Title: Auxillary data for gage package
Version: 2.10.0
Date: 2013-9-24
Author: Weijun Luo
Maintainer: Weijun Luo <luo_weijun@yahoo.com>
Description: This is a supportive data package for the software package, gage. However, the data supplied here are also useful for gene set or pathway analysis or microarray data analysis in general. In this package, we provide two demo microarray dataset: GSE16873 (a breast cancer dataset from GEO) and BMP6 (originally published as an demo dataset for GAGE, also registered as GSE13604 in GEO). This package also includes commonly used gene set data based on KEGG pathways and GO terms for major research species, including human, mouse, rat and budding yeast. Mapping data between common gene IDs for budding yeast are also included.
biocViews: ExperimentData, StemCell, CancerData, BreastCancerData,
MicroarrayData, GEO
Suggests: gage, pathview, genefilter
License: GPL (>=2.0)
LazyLoad: yes
Depends: R (>= 2.10)
NeedsCompilation: no
Packaged: 2016-05-07 20:18:19 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'gageData' ...
** data
** help
*** installing help indices
  converting help for package 'gageData'
    finding HTML links ... done
    bmp6                                    html  
    genesets                                html  
    gse16873.full                           html  
    hnrnp.cnts                              html  
    sc.gene                                 html  
** building package indices
** testing if installed package can be loaded
* DONE (gageData)
Making 'packages.html' ... done