gpmap

Package: gpmap
Type: Package
Title: Analysing and plotting genotype-phenotype maps
Version: 0.1.1
Date: 2014-01-02
Author:
Arne B. Gjuvsland <arne.gjuvsland@nmbu.no> and Yunpeng Wang <yunpeng.wng@gmail.com>
Maintainer: Arne B. Gjuvsland <arne.gjuvsland@nmbu.no>
Depends: isotone, plyr, ggplot2, foreach
Description: This package contains tools for studying genotype-phenotype (GP) maps for bi-allelic loci underlying quantitative phenotypes. The 0.1 version is released in connection with the publication of Gjuvsland et al. (2003) and implements basic line plots and the monotonicity measures for GP maps presented in the paper. Reference: Gjuvsland AB, Wang Y, Plahte E and Omholt SW (2013) Monotonicity is a key feature of genotype-phenotype maps. Front. Genet. 4:216. doi: 10.3389/fgene.2013.00216 [href{http://www.frontiersin.org/Journal/10.3389/fgene.2013.00216/full}{link}]
License: GPL-3
LazyLoad: yes
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-01-09 12:30:26

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'gpmap' ...
** package 'gpmap' successfully unpacked and MD5 sums checked
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'gpmap'
    finding HTML links ... done
    GPmaps                                  html  
    decompose_monotone                      html  
    degree_of_monotonicity                  html  
    enumerate_genotypes                     html  
    generate_gpmap                          html  
    gpmap-package                           html  
    monotone_regression                     html  
    partial_genotype_order                  html  
    plot.gpmap                              html  
    print.gpmap                             html  
** building package indices
** testing if installed package can be loaded
* DONE (gpmap)
Making 'packages.html' ... done