imager

Package: imager
Type: Package
Title: Image Processing Library Based on CImg
Version: 0.20
Date: 2016-04-20
Author: Simon Barthelme [aut, cre],
Antoine Cecchi [ctb]
Authors@R: c(person("Simon","Barthelme",email="simon.barthelme@gipsa-lab.fr",role=c("aut","cre")),
person("Antoine","Cecchi",email="antoine.cecchi@phelma.grenoble-inp.fr",role="ctb"))
Maintainer: Simon Barthelme <simon.barthelme@gipsa-lab.fr>
Description: Fast image processing for images in up to 4 dimensions (two spatial
dimensions, one time/depth dimension, one colour dimension). Provides most
traditional image processing tools (filtering, morphology, transformations,
etc.) as well as various functions for easily analysing image data using R.
License: LGPL
Imports: Rcpp (>= 0.11.5), methods, stringr, png, jpeg, readbitmap, grDevices
Depends: R (>= 2.10.0), plyr, magrittr
SystemRequirements: fftw3
Enhances: spatstat
LinkingTo: Rcpp
LazyData: true
RoxygenNote: 5.0.1
Suggests: knitr, rmarkdown, ggplot2, dplyr, scales
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2016-04-28 06:48:52 UTC; simon
Repository: CRAN
Date/Publication: 2016-04-28 11:50:04

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'imager' ...
** package 'imager' successfully unpacked and MD5 sums checked
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for X... libraries , headers 
configure: creating ./config.status
config.status: creating src/Makevars
** libs
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c colourspace.cpp -o colourspace.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c display.cpp -o display.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c drawing.cpp -o drawing.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c filtering.cpp -o filtering.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c interpolation.cpp -o interpolation.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c morphology.cpp -o morphology.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c transformations.cpp -o transformations.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c utils.cpp -o utils.o
g++ -I/home/ddbj/local/lib64/R/include -DNDEBUG -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_r_mode -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -DSTRICT_R_HEADERS -I/usr/local/include -I"/home/ddbj/local/lib64/R/library/Rcpp/include"   -fpic  -g -O2  -c wrappers.cpp -o wrappers.o
g++ -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o imager.so RcppExports.o colourspace.o display.o drawing.o filtering.o interpolation.o morphology.o transformations.o utils.o wrappers.o -lX11 -lfftw3 -L/home/ddbj/local/lib64/R/lib -lR
colourspace.o: In function `cimg_library::cimg::filenamerand()':
/tmp/Rtmp3Cb89b/R.INSTALL3d505bbdced4/imager/src/../inst/include/CImg.h:4930: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
installing to /home/ddbj/local/lib64/R/library/imager/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'imager'
    finding HTML links ... done
    FFT                                     html  
    add.colour                              html  
    as.cimg                                 html  
    as.cimg.array                           html  
    as.cimg.data.frame                      html  
    as.cimg.function                        html  
    as.data.frame.cimg                      html  
    as.raster.cimg                          html  
    at                                      html  
    autocrop                                html  
    blur_anisotropic                        html  
    boats                                   html  
    boxblur                                 html  
    boxblur_xy                              html  
    bucketfill                              html  
    capture.plot                            html  
    center.stencil                          html  
    channels                                html  
    cimg                                    html  
    cimg.dimensions                         html  
    cimg.extract                            html  
    cimg2im                                 html  
    convolve                                html  
    correlate                               html  
    crop.borders                            html  
    deriche                                 html  
    diffusion_tensors                       html  
    displacement                            html  
    display                                 html  
    display_list                            html  
    distance_transform                      html  
    erode                                   html  
    extract_patches                         html  
    frames                                  html  
    get.locations                           html  
    get.stencil                             html  
    get_gradient                            html  
    get_hessian                             html  
    grayscale                               html  
    haar                                    html  
    idply                                   html  
    iiply                                   html  
    ilply                                   html  
    im2cimg                                 html  
    im_split                                html  
    imager                                  html  
    imager.colourspaces                     html  
    imager.combine                          html  
    imager.replace                          html  
    imager.subset                           html  
    imappend                                html  
    imdirac                                 html  
    imdraw                                  html  
    imfill                                  html  
    imgradient                              html  
    imhessian                               html  
    iminfo                                  html  
    imnoise                                 html  
    imrotate                                html  
    imsharpen                               html  
    imshift                                 html  
    imsplit                                 html  
    imsub                                   html  
    imwarp                                  html  
    interp                                  html  
    isoblur                                 html  
    label                                   html  
    liply                                   html  
    load.example                            html  
    load.image                              html  
    medianblur                              html  
    mirror                                  html  
    pad                                     html  
    periodic.part                           html  
    permute_axes                            html  
    pixel.grid                              html  
    pixel.index                             html  
    play                                    html  
    plot.cimg                               html  
    renorm                                  html  
    resize                                  html  
    resize_uniform                          html  
    rotate_xy                               html  
    save.image                              html  
    selectSimilar                           html  
    squeeze                                 html  
    stencil.cross                           html  
    threshold                               html  
    vanvliet                                html  
    warp                                    html  
    watershed                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (imager)
Making 'packages.html' ... done