methVisual

Package: methVisual
Title: Methods for visualization and statistics on DNA methylation data
Description: The package 'methVisual' allows the visualization of DNA
methylation data after bisulfite sequencing.
Version: 1.24.0
Author: A. Zackay, C. Steinhoff
Maintainer: Arie Zackay <arie.zackay@mail.huji.ac.il>
Depends: R (>= 2.11.0), Biostrings (>= 2.4.8), plotrix, gsubfn,
grid, sqldf
Imports: Biostrings, ca, graphics, grDevices, grid, gridBase, IRanges,
stats, utils
License: GPL (>= 2)
biocViews: DNAMethylation, Clustering, Classification
NeedsCompilation: no
Packaged: 2016-05-04 03:25:04 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'methVisual' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'methVisual'
    finding HTML links ... done
    Cooccurrence                            html  
    MethAlignNW                             html  
    MethDataInput                           html  
    MethLollipops                           html  
    MethylQC                                html  
    cgInAlign                               html  
    cgMethFinder                            html  
    coversionGenom                          html  
    findNonAligned                          html  
    heatMapMeth                             html  
    makeDataMethGFF                         html  
    makeLocalExpDir                         html  
    makeTabFilePath                         html  
    matrixSNP                               html  
    methCA                                  html  
    methData                                html  
    methFisherTest                          html  
    methWhitneyUTest                        html  
    plotAbsMethyl                           html  
    plotMatrixSNP                           html  
    readBisulfFASTA                         html  
    selectRefSeq                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (methVisual)
Making 'packages.html' ... done