Cooccurrence
(Package: methVisual) :
Visualization of binary methylation data
Visualization of binary methylation data including neighboured cooccurrence
● Data Source:
BioConductor
● Keywords: graphs
● Alias: Cooccurrence
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0 images
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MethAlignNW
(Package: methVisual) :
Summary of methylation states
Summarize the methylation states after calculating pairwise alignments of each examined sequences and the genomic sequence
● Data Source:
BioConductor
● Keywords: graphs
● Alias: MethAlignNW
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0 images
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Control function in order to check existence of sequences .faste files
● Data Source:
BioConductor
● Keywords: graphs
● Alias: MethDataInput
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0 images
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Visualization of methylation patterns in terms of "Lollipops" plot
● Data Source:
BioConductor
● Keywords: graphs
● Alias: MethLollipops
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1 images
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MethylQC
(Package: methVisual) :
Quality controle (QC) on Methylation Data
Processing a quality control (QC) procedure on bisulafite sequences
● Data Source:
BioConductor
● Keywords: graphs
● Alias: MethylQC
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0 images
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Calculating amount of CpGs between alignments border
● Data Source:
BioConductor
● Keywords: graphs
● Alias: cgInAlign
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CpGs methylation status on clone sequence
● Data Source:
BioConductor
● Keywords: graphs
● Alias: cgMethFinder
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0 images
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Bisulfite conversion of genomic Sequence
● Data Source:
BioConductor
● Keywords: graphs
● Alias: coversionGenom
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Determination of non-aligned CpG positions
● Data Source:
BioConductor
● Keywords: graphs
● Alias: findNonAligned
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0 images
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heatMapMeth
(Package: methVisual) :
HeatMap diagram over methylation data
HeatMap diagram of methylation classes over CpG position and sequence level
● Data Source:
BioConductor
● Keywords: graphs
● Alias: heatMapMeth
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0 images
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