mirIntegrator

Package: mirIntegrator
Version: 1.2.0
Date: 2015-05-08
Type: Package
Title: Integrating microRNA expression into signaling pathways for
pathway analysis
Author: Diana Diaz <dmd at wayne dot edu> and Sorin Draghici <sorin at
wayne dot edu>
Maintainer: Diana Diaz <dmd@wayne.edu>
Depends: R (>= 3.2)
Imports: graph, ROntoTools, ggplot2, org.Hs.eg.db, AnnotationDbi,
Rgraphviz
Suggests: RUnit, BiocGenerics
Description: Tools for augmenting signaling pathways to perform pathway
analysis of microRNA and mRNA expression levels.
License: GPL (>=3)
URL: http://vortex.cs.wayne.edu/
biocViews: Network, Microarray, GraphAndNetwork, Pathways, KEGG
NeedsCompilation: no
Packaged: 2016-05-04 06:21:42 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'mirIntegrator' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mirIntegrator'
    finding HTML links ... done
    GSE43592_mRNA                           html  
    GSE43592_miRNA                          html  
    augmented_pathways                      html  
    integrate_mir                           html  
    kegg_pathways                           html  
    mirTarBase                              html  
    names_pathways                          html  
    pathways2pdf                            html  
    plot_augmented_pathway                  html  
    plot_change                             html  
    smallest_pathway                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (mirIntegrator)
Making 'packages.html' ... done