quantsmooth

Package: quantsmooth
Type: Package
Title: Quantile smoothing and genomic visualization of array data
Version: 1.38.0
Date: 2014-10-07
Author: Jan Oosting, Paul Eilers, Renee Menezes
Maintainer: Jan Oosting <j.oosting@lumc.nl>
Depends: R (>= 2.10.0), quantreg, grid
Description: Implements quantile smoothing as introduced in: Quantile
smoothing of array CGH data; Eilers PH, de Menezes RX;
Bioinformatics. 2005 Apr 1;21(7):1146-53.
License: GPL-2
biocViews: Visualization, CopyNumberVariation
NeedsCompilation: no
Packaged: 2016-05-04 02:53:05 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'quantsmooth' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'quantsmooth'
    finding HTML links ... done
    Chromosome14                            html  
    chrom.bands                             html  
    drawSimpleChrom                         html  
    getChangedIdx                           html  
    getChangedRegions                       html  
    getLambdaMin                            html  
    grid.chromosome                         html  
    lengthChromosome                        html  
    numericCHR                              html  
    paintCytobands                          html  
    plotChromosome                          html  
    plotSmoothed                            html  
    position2Cytoband                       html  
    prepareGenomePlot                       html  
    quantsmooth                             html  
    quantsmooth.cv                          html  
    quantsmooth.seg                         html  
    scaleto                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (quantsmooth)
Making 'packages.html' ... done