robCompositions

Package: robCompositions
Type: Package
Title: Robust Estimation for Compositional Data
Version: 2.0.0
Date: 2016-02-07
Depends: R (>= 2.10), robustbase, ggplot2, data.table, pls
Imports: e1071, cvTools, rrcov, GGally, MASS, sROC, VIM
Suggests: knitr
VignetteBuilder: knitr
Author: Matthias Templ, Karel Hron, Peter Filzmoser
Maintainer: Matthias Templ <templ@tuwien.ac.at>
Description: Methods for analysis of compositional data including robust
methods, imputation, methods to replace rounded zeros, (robust) outlier
detection for compositional data, (robust) principal component analysis for
compositional data, (robust) factor analysis for compositional data, (robust)
discriminant analysis for compositional data (Fisher rule), robust regression
with compositional predictors and (robust) Anderson-Darling normality tests for
compositional data as well as popular log-ratio transformations (addLR, cenLR,
isomLR, and their inverse transformations). In addition, visualisation and
diagnostic tools are implemented as well as high and low-level plot functions
for the ternary diagram.
License: GPL-2
LazyLoad: yes
LazyData: true
RoxygenNote: 5.0.1
NeedsCompilation: yes
Packaged: 2016-02-08 10:08:45 UTC; templ
Repository: CRAN
Date/Publication: 2016-02-08 15:39:39

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'robCompositions' ...
** package 'robCompositions' successfully unpacked and MD5 sums checked
** libs
gcc -I/home/ddbj/local/lib64/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -c robCompositions.c -o robCompositions.o
gcc -shared -L/home/ddbj/local/lib64/R/lib -L/usr/local/lib64 -o robCompositions.so robCompositions.o -L/home/ddbj/local/lib64/R/lib -lR
installing to /home/ddbj/local/lib64/R/library/robCompositions/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'robCompositions'
    finding HTML links ... done
    aDist                                   html  
    addLR                                   html  
    addLRinv                                html  
    adjust                                  html  
    adtest                                  html  
    adtestWrapper                           html  
    arcticLake                              html  
    biplot.factanal                         html  
    biplot.pcaCoDa                          html  
    bootnComp                               html  
    cancer                                  html  
    cenLR                                   html  
    cenLRinv                                html  
    coffee                                  html  
    compareMahal                            html  
    constSum                                html  
    daFisher                                html  
    economy                                 html  
    expenditures                            html  
    expendituresEU                          html  
    gemas                                   html  
    gm                                      html  
    haplogroups                             html  
    impAll                                  html  
    impCoda                                 html  
    impKNNa                                 html  
    impRZalr                                html  
    impRZilr                                html  
    imputeBDLs                              html  
    isomLR                                  html  
    laborForce                              html  
    lifeExpGdp                              html  
    lmCoDaX                                 html  
    machineOperators                        html  
    mcad                                    html  
    missPatterns                            html  
    mortality                               html  
    orthbasis                               html  
    outCoDa                                 html  
    pcaCoDa                                 html  
    pfa                                     html  
    phd                                     html  
    plot.imp                                html  
Rd warning: /tmp/RtmpYTIJB5/R.INSTALL667868f94c3b/robCompositions/man/plot.imp.Rd:132: missing file link 'scatterplot.matrix'
    plot.pcaCoDa                            html  
    print.imp                               html  
    robCompositions-package                 html  
    skyeLavas                               html  
    summary.imp                             html  
    ternaryDiag                             html  
    ternaryDiagAbline                       html  
    ternaryDiagEllipse                      html  
    ternaryDiagPoints                       html  
    trondelagC                              html  
    trondelagO                              html  
    variation                               html  
    zeroOut                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (robCompositions)
Making 'packages.html' ... done