scrime

Package: scrime
Type: Package
Title: Analysis of High-Dimensional Categorical Data such as SNP Data
Version: 1.3.3
Date: 2013-09-01
Author: Holger Schwender, with a contribution of Arno Fritsch
Maintainer: Holger Schwender <holger.schw@gmx.de>
Suggests: MASS, RSQLite (>= 0.4-15), oligoClasses (>= 1.1.9)
Description: Tools for the analysis of high-dimensional data developed/implemented
at the group "Statistical Complexity Reduction In Molecular Epidemiology" (SCRIME).
Main focus is on SNP data. But most of the functions can also be applied to other
types of categorical data.
License: GPL-2
Packaged: 2013-09-01 20:12:40 UTC; schwender
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-09-02 00:22:22

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'scrime' ...
** package 'scrime' successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'scrime'
    finding HTML links ... done
    abf                                     html  
    analyse.models                          html  
    buildSNPannotation                      html  
    colEpistatic                            html  
    computeContCells                        html  
    computeContClass                        html  
    fblr                                    html  
    gknn                                    html  
    identifyMonomorphism                    html  
    knncatimpute                            html  
    knncatimputeLarge                       html  
    pamCat                                  html  
    pcc                                     html  
    predict.pamCat                          html  
    predictFBLR                             html  
    recodeAffySNP                           html  
    recodeSNPs                              html  
    rowCATTs                                html  
    rowChisq2Class                          html  
    rowChisqStats                           html  
    rowCors                                 html  
    rowFreqs                                html  
    rowHWEs                                 html  
    rowMAFs                                 html  
    rowMsquares                             html  
    rowScales                               html  
    rowTables                               html  
    rowTrendFuzzy                           html  
    rowTrendStats                           html  
    scrime-internal                         html  
    shortenGeneDescription                  html  
    showChanges                             html  
    simulateSNPcatResponse                  html  
    simulateSNPglm                          html  
    simulateSNPs                            html  
    smc                                     html  
    snp2bin                                 html  
    summary.simSNPglm                       html  
** building package indices
** testing if installed package can be loaded
* DONE (scrime)
Making 'packages.html' ... done