scsR

Package: scsR
Type: Package
Title: SiRNA correction for seed mediated off-target effect
Version: 1.8.0
Date: 2014-10-28
Author: Andrea Franceschini
Maintainer: Andrea Franceschini <andrea.franceschini@isb-sib.ch>, Roger Meier <roger.meier@lmsc.ethz.ch>, Christian von Mering <mering@imls.uzh.ch>
Description: Corrects genome-wide siRNA screens for seed mediated off-target effect. Suitable functions to identify the effective seeds/miRNAs and to visualize their effect are also provided in the package.
License: GPL-2
Depends: R (>= 2.14.0), STRINGdb, methods, BiocGenerics, Biostrings,
IRanges, plyr, tcltk
Imports: sqldf, hash, ggplot2, graphics, grDevices, RColorBrewer
Suggests: RUnit
biocViews: Preprocessing
NeedsCompilation: no
Packaged: 2016-05-04 05:20:40 UTC; biocbuild

Install log

* installing to library '/home/ddbj/local/lib64/R/library'
* installing *source* package 'scsR' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: S3 methods 'as.character.tclObj', 'as.character.tclVar', 'as.double.tclObj', 'as.integer.tclObj', 'as.logical.tclObj', 'as.raw.tclObj', 'print.tclObj', '[[.tclArray', '[[<-.tclArray', '$.tclArray', '$<-.tclArray', 'names.tclArray', 'names<-.tclArray', 'length.tclArray', 'length<-.tclArray', 'tclObj.tclVar', 'tclObj<-.tclVar', 'tclvalue.default', 'tclvalue.tclObj', 'tclvalue.tclVar', 'tclvalue<-.default', 'tclvalue<-.tclVar', 'close.tkProgressBar' were declared in NAMESPACE but not found
Error : .onLoad failed in loadNamespace() for 'tcltk', details:
  call: fun(libname, pkgname)
  error: Tcl/Tk support is not available on this system
Error : package 'tcltk' could not be loaded
ERROR: lazy loading failed for package 'scsR'
* removing '/home/ddbj/local/lib64/R/library/scsR'