Last data update: 2014.03.03

Data Source

R Release (3.2.3)
CranContrib
BioConductor
All

Data Type

Packages
Functions
Images
Data set

Classification

Results 1 - 2 of 2 found.
[1] < 1 > [1]  Sort:

cytoDiv : Cytometric diversity indices

Package: cytoDiv
Version: 0.5-3
Date: 2012-01-17
Title: Cytometric diversity indices
Author: Francois Ribalet <ribalet@u.washington.edu>
Maintainer: Francois Ribalet <ribalet@u.washington.edu>
Depends: R (>= 2.13.1), GenKern, plotrix
Description: Calculates ecological diversity indices for a microbial
community
License: GPL (>= 2)
URL: http://seaflow.ocean.washington.edu
Packaged: 2012-01-17 22:51:14 UTC; francois
Repository: CRAN
Date/Publication: 2012-01-18 06:51:59

● Data Source: CranContrib
● 0 images, 1 functions, 0 datasets
● Reverse Depends: 0

synRNASeqNet : Synthetic RNA-Seq Network Generation and Mutual Information Estimates

Package: synRNASeqNet
Type: Package
Title: Synthetic RNA-Seq Network Generation and Mutual Information
Estimates
Version: 1.0
Date: 2015-04-07
Author: Luciano Garofano, Stefano Maria Pagnotta, Michele Ceccarelli
Maintainer: Luciano Garofano <lucianogarofano88@gmail.com>
Depends: R (>= 3.1.1), parallel, parmigene, GenKern, igraph
URL: https://github.com/lucgar/synRNASeqNet
Imports: KernSmooth
Description: It implements various estimators of mutual information, such as
the maximum likelihood and the Millow-Madow estimator, various Bayesian
estimators, the shrinkage estimator, and the Chao-Shen estimator. It also
offers wrappers to the kNN and kernel density estimators. Furthermore, it
provides various index of performance evaluation such as precision, recall,
FPR, F-Score, ROC-PR Curves and so on. Lastly, it provides a brand new way
of generating synthetic RNA-Seq Network with known dependence structure.
License: GPL (>= 3)
NeedsCompilation: no
Packaged: 2015-04-20 08:45:39 UTC; luciano
Repository: CRAN
Date/Publication: 2015-04-20 11:55:18

● Data Source: CranContrib
● 0 images, 20 functions, 0 datasets
● Reverse Depends: 0