R Graphical Manual

Last data update: 2014.03.03

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R Release (3.2.3)
CranContrib
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Results 1 - 3 of 3 found.
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GeneBreak : Gene Break Detection

Package: GeneBreak
Type: Package
Version: 1.2.0
Title: Gene Break Detection
Author: Evert van den Broek, Stef van Lieshout
Maintainer: Evert van den Broek <vandenbroek.evert@gmail.com>
Imports: graphics, methods
Depends: R (>= 3.2), QDNAseq, CGHcall, CGHbase, GenomicRanges
URL: https://github.com/stefvanlieshout/GeneBreak
Description: Recurrent breakpoint gene detection on copy number
aberration profiles.
License: GPL-2
biocViews: aCGH, CopyNumberVariation, DNASeq, Genetics, Sequencing,
WholeGenome, Visualization
LazyData: FALSE
NeedsCompilation: no
Packaged: 2016-05-04 06:37:34 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: CopyNumberVariation, DNASeq, Genetics, Sequencing, Visualization, WholeGenome, aCGH
● 3 images, 22 functions, 6 datasets
● Reverse Depends: 0

QDNAseq.hg19 : QDNAseq bin annotation for hg19

Package: QDNAseq.hg19
Type: Package
Title: QDNAseq bin annotation for hg19
Version: 1.2.0
Date: 2015-09-30
Author: Daoud Sie [aut, cre]
Maintainer: Daoud Sie <d.sie@vumc.nl>
Description: This package provides QDNAseq bin annotations for the
human genome build hg19.
Depends: R (>= 3.2.1), QDNAseq
biocViews: ExperimentData, OrganismData, Homo_sapiens_Data
License: GPL
URL: https://github.com/tgac-vumc/QDNAseq.hg19
BugReports: https://github.com/tgac-vumc/QDNAseq.hg19/issues
NeedsCompilation: no
Packaged: 2016-05-07 20:55:17 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: ExperimentData, Homo_sapiens_Data, OrganismData
● 0 images, 1 functions, 9 datasets
● Reverse Depends: 0

QDNAseq.mm10 : Bin annotation mm10

Package: QDNAseq.mm10
Type: Package
Title: Bin annotation mm10
Version: 1.2.0
Date: 2015-09-30
Author: Daoud Sie [aut, cre]
Maintainer: Daoud Sie <d.sie@vumc.nl>
Description: This package provides QDNAseq bin annotations for the
mouse genome build mm10.
Depends: R (>= 3.2.1), QDNAseq
biocViews: ExperimentData, OrganismData, Mus_musculus_Data
License: GPL
URL: https://github.com/tgac-vumc/QDNAseq.mm10
BugReports: https://github.com/tgac-vumc/QDNAseq.mm10/issues
NeedsCompilation: no
Packaged: 2016-05-07 20:55:21 UTC; biocbuild

● Data Source: BioConductor
● BiocViews: ExperimentData, Mus_musculus_Data, OrganismData
● 0 images, 1 functions, 9 datasets
● Reverse Depends: 0