Package: gcbd
Type: Package
Title: GPU/CPU Benchmarking in Debian-based systems
Version: 0.2.5
Date: $Date$
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Description: GPU/CPU Benchmarking on Debian-package based systems
This package benchmarks performance of a few standard linear algebra
operations (such as a matrix product and QR, SVD and LU decompositions)
across a number of different BLAS libraries as well as a GPU implementation.
.
To do so, it takes advantage of the ability to 'plug and play' different
BLAS implementations easily on a Debian and/or Ubuntu system. The current
version supports
- reference blas (refblas) which are unaccelerated as a baseline
- Atlas which are tuned but typically configure single-threaded
- Atlas39 which are tuned and configured for multi-threaded mode
- Goto Blas which are accelerated and multithreaded
- Intel MKL which are a commercial accelerated and multithreaded version.
As for GPU computing, we use the CRAN package
- gputools
.
For Goto Blas, the gotoblas2-helper script from the ISM in Tokyo can be
used. For Intel MKL we use the Revolution R packages from Ubuntu 9.10.
License: GPL (>= 2)
LazyLoad: yes
Depends: R (>= 2.11.1), RSQLite, plyr, reshape, lattice
Suggests: gputools, Matrix
SystemRequirements: Debian or Ubuntu system with access to Goto Blas,
Intel MKL, Atlas development build as well as a Nvidia GPU with
CUDA support
OS_type: unix
Packaged: 2013-12-12 03:32:49.992031 UTC; edd
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2013-12-12 07:29:10
Package: MUCflights
Title: Munich Franz-Josef-Strauss Airport Pattern Analysis
Version: 0.0-3
Date: 2011-02-21
Author: The students of the `Advanced R Programming Course' Basil Abou
El-Komboz, Andreas Bender, Abdelilah El Hadad, Laura Goeres,
Roman Hornung, Max Hughes-Brandl, Christian Lindenlaub,
Christina Riedel, Ariane Straub, Florian Wickler under the
supervision of Manuel Eugster and Torsten Hothorn
Maintainer: Manuel Eugster <Manuel.Eugster@stat.uni-muenchen.de>
Description: Functions for downloading flight data from
http://www.munich-airport.de and for analyzing flight patterns.
License: GPL (>= 2)
Depends: XML, geosphere (>= 1.2-15), sp, RSQLite, NightDay
URL: http://www.youtube.com/watch?v=y3RW_N-TPb4
LazyLoad: yes
Packaged: 2011-02-22 08:00:21 UTC; hothorn
Repository: CRAN
Date/Publication: 2011-02-22 08:14:43
Package: SSN
Type: Package
Title: Spatial Modeling on Stream Networks
Version: 1.1.7
Date: 2016-3-16
Depends: R (>= 3.0.2), RSQLite, sp
Imports: MASS, igraph (>= 1.0.0), maptools, lattice, methods
Author: Jay Ver Hoef and Erin Peterson
Maintainer: Jay Ver Hoef <ver.hoef@SpatialStreamNetworks.com>
Description: Geostatistical modeling for data on stream networks, including models based on in-stream distance. Models are created using moving average constructions. Spatial linear models, including covariates, can be fit with ML or REML. Mapping and other graphical functions are included.
License: GPL-2
LazyLoad: yes
LinkingTo: BH
NeedsCompilation: yes
Packaged: 2016-03-17 06:13:16 UTC; jay
Repository: CRAN
Date/Publication: 2016-03-17 13:58:31
Package: RQDA
Type: Package
Title: R-based Qualitative Data Analysis
Version: 0.2-7
Date: 2014-10-27
Author: HUANG Ronggui
Maintainer: HUANG Ronggui <ronggui.huang@gmail.com>
Depends: R (>= 2.8.0), RSQLite (>= 1.0.0), gWidgetsRGtk2 (>= 0.0-36)
Imports: RGtk2 (>= 2.20), DBI, igraph, gWidgets (>= 0.0-31)
Enhances: tcltk, rjpod, d3Network
Description: R package for Qualitative Data Analysis. Current version only supports plain text, but it can import PDF highlights if the Enhance package of rjpod, which is available on R-Forge, is installed.
Additional_repositories: http://r-forge.r-project.org/
License: BSD_3_clause + file LICENSE
LazyLoad: yes
SystemRequirements: Java (>= 1.6) for rjpod
URL: http://rqda.r-forge.r-project.org/
Packaged: 2014-10-27 16:30:26 UTC; rghuang
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2014-10-27 20:19:04
Package: filematrix
Type: Package
Title: File-Backed Matrix Class with Convenient Read and Write Access
Version: 1.1.0
Date: 2016-05-23
Author: Andrey A Shabalin
Maintainer: Andrey A Shabalin <ashabalin@vcu.edu>
Description: Interface for working with large matrices stored in files,
not in computer memory. Supports multiple non-character
data types (double, integer, logical and raw) of
various sizes (e.g. 8 and 4 byte real values).
Access to parts of the matrix is done by indexing,
exactly as with usual R matrices.
Supports very large matrices.
Tested on multi-terabyte matrices.
Allows for more than 2^32 rows or columns.
Allows for quick addition of extra columns to a filematrix.
Cross-platform as the package has R code only.
BugReports: https://github.com/andreyshabalin/filematrix/issues
URL: https://github.com/andreyshabalin/filematrix
License: LGPL-3
Depends: methods, RSQLite, utils
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown, bigmemory
NeedsCompilation: no
Packaged: 2016-05-23 08:51:17 UTC; Andrey
Repository: CRAN
Date/Publication: 2016-05-23 11:28:07
Package: snplist
Type: Package
Title: Tools to Create Gene Sets
Version: 0.15
Date: 2015-11-19
Author: Chanhee Yi, Alexander Sibley, and Kouros Owzar
Maintainer: Alexander Sibley <alexander.sibley@dm.duke.edu>
Description: A set of functions to create SQL tables of gene and SNP information and compose them into a SNP Set, for example for use with the RSNPset package, or to export to a PLINK set.
License: GPL-3
Depends: R (>= 3.0.0), RSQLite (>= 0.11.4)
Imports: biomaRt (>= 2.16.0), Rcpp (>= 0.10.5), R.utils (>= 1.27.1), DBI (>= 0.3.1)
Suggests: knitr
LinkingTo: Rcpp
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2015-11-19 23:25:09 UTC; abs33
Repository: CRAN
Date/Publication: 2015-11-20 08:25:05
providing 
.